Sood Publications

National Human Genome Research Institute

National Institutes of Health
U.S. Department of Health and Human Services

Raman Sood, Ph.D.

Associate Investigator, Translational and Functional Genomics Branch
Head, Zebrafish Core

Selected Publications

International FMF Consortium.  Ancient missense mutations in a new member of the RoRet gene family are likely to cause familial Mediterranean fever.  Cell, 90: 797-807. 1997. [PubMed]

Sood R, Bonner TI, Makalowska I, Stephan DA, Robbins CM, Connors TD, Morgenbesser SD, Su K, Pinkett H, Faruque MU, Graham C, Baxevanis AD, Klinger KW, Landes GM, Trent JM and Carpten JD. Cloning and characterization of 13 novel transcripts and the human RGS8 gene from the 1q25 region encompassing the hereditary prostate cancer (HPC1) locus. Genomics, 73: 211-222. 2001. [PubMed]

Pollock PM, Cohen-Solal K, Sood R, Namkoong J, Martino JJ, Koganti A, Zhu H, Robbins C, Makalowska I, Shin S-S, Martin Y, Roberts KG, Yudt LM, Chen A, Cheng J, Incao A, Pinkett HW, Graham CL, Dunn K, Crespo-Carbone SM, Mackason KR, Ryan KB, Sinsimer D, Goydos J, Reuhl KR, Eckhaus M, Meltzer PS, Pavan WJ, Trent JM, and Chen S. Melanoma mouse model implicates metabotropic glutamate signaling in melanocytic neoplasia. Nat Genet, 34: 108-112. 2003. [Full Text ]

Zhang J., Wheeler D., Yakub I., Wei S., Sood R., Rowe W., Liu P.P., Gibbs R. and Buetow K. SNPDetector: a software tool for sensitive and accurate SNP detection. PLoS Computational Biology, 1: 0395-0404. 2005. [PubMed]

Sood R, English MA, Jones M, Mullikin J, Wang DM, Anderson M, Wu D, Chandrasekharappa SC, Yu J, Zhang J, Paul Liu P. Methods for reverse genetic screening in zebrafish by resequencing and TILLING. Methods, 39: 220-227. 2006. [PubMed]

Jin H, Sood R, Xu J , Zhen F, English MA, Liu PP and Wen Z. Definitive hematopoietic stem/progenitor cells manifest distinct differentiation output in the zebrafish VDA and PBI. Development, 136: 647-654. 2009. [PubMed]

Belele CL, English MA, Chahal J, Burnetti A, Finckbeiner SM, Gibney G, Kirby M, Sood R and Liu PP. Differential requirement for Gata1 DNA binding and transactivation between primitive and definitive stages of hematopoiesis in zebrafish. Blood, 114: 5162-5172. 2009. [PubMed]

Sood R, English MA, Belele CL, Jin H, Bishop K, Haskins R, McKinney MC, Chahal J, Weinstein BM, Wen Z and Liu PP. Development of multi-lineage adult hematopoiesis in the zebrafish with a runx1 truncation mutation. Blood, 115(14):2806-9. 2010. [PubMed]

Shive HR, West RR, Embree LJ, Azuma M, Sood R, Liu P and Hickstein DD. Brca2 in zebrafish ovarian development, spermatogenesis, and tumorigenesis. PNAS, 107: 19350-19355. 2010. [PubMed]

Gao B, Song H, Bishop K, Elliot G, Garrett L, English M, Andre P, Robinson J, Sood R, Minami Y, Economides AN, and Yang Y. Wnt signaling gradients establish planar cell polarity by inducing Vangl2 phosphorylation through Ror2. Developmental Cell, 20: 163-176. 2011. [PubMed]

Sood R and Liu PP. Novel insights into the genetic controls of primitive and definitive hematopoiesis from zebrafish models. Advances in Hematology, 2012:830703. 2012. [PubMed]

Sood R, Carrington B, Bishop K, Jones MP, Rissone A, Candotti F, Chandrasekharappa SC, Liu P. Efficient Methods For Targeted Mutagenesis in Zebrafish Using Zinc-Finger Nucleases: Data From Targeting of Nine Genes Using CompoZr or CoDA ZFN. PLos One, 8:e57239. 2013. [PubMed]

Vilboux T, Lev A, Malicdan MC, Simon AJ, Jarvinen P, Racek T, Puchalka J, Sood R, Carrington B, Bishop K, Mullikin J, Huizing M, Garty BZ, Eyal E, Wolach B, Gavrieli R, Toren A, Soudack M, Atawneh OM, Babushkin T, Schiby g, Cullinane A, Avivi C, Polak-Charcon S, Barshack I, Amariglio N, Rechavi  G, van der Werff ten Bosch J, Anikster Y, Klein C, Gahl WA, Somech R. A congenital neutrophil defect syndrome associated with mutations in VPS45. N Eng J Med, 369: 54-65. 2013. [PubMed]

Zhou Q, Yang D, Ombrello AK, Zavialov AV, Toro C, Zavialov AV, Stone DL, Chae JJ, Rosenzweig SD, Bishop K, Barron KS, Kuehn HS, Hoffman P, Negro A, Tsai WL, Cowen EW, Pei W, Milner JD, Silvin C, Heller T, Chin DT, Patronas NJ, Barber JS, Lee CR, Wood GM, Ling A, Kelly SJ, Kleiner DE, Mullikin JC, Ganson NJ, Kong HH, Hambleton S, Candotti F, Quezado MM, Calvo KR, Alao H, Barham BK, Jones A, Meschia JF, Worrall BB, Kasner SE, Rich SS, Goldbach-Mansky R, Abinum M, Chalom E, Gotte AC, Punaro M, Pascual V, Verbsky JW, Torgerson TR, Singer NG, Gershon TR, Ozen S, Karadag O, Fleisher TA, Remmers EF, Burgess SM, Moir SL, Gadina M, Sood R, Hershfield MS, Boehm M, Kastner DL, Aksentijevich I. Early-onset stroke and vasculopathy associated with mutations in ADA2. N Eng J Med, 370: 911-920. 2014. [PubMed]

Bresciani E, Carrington B, Wincovitch S, Jones M, gore AV, Weinstein BM, Sood R, and Liu P. CBFb and RUNX1 are required at two different steps during the development of hematopoietic stem cells in zebrafish. Blood, pii: blood-2013-10-531988. Epub ahead of print. 2014. [PubMed]

Sood R, Hansen N, Donovan FX, Carrington B, Bucci D, Maskeri B, Young A, Trivedi NS, Kohlschmidt J, Stone RM, Caligiuri M, Chandrasekharappa SC, Marcucci G, Mullikin JC, Bloomfield CD and Liu P. Somatic mutational landscape of AML with inv(16) or t(8;21) identifies patterns of clonal evolution in relapse leukemia.  Leukemia, 2015. doi: 10.1038/leu.2015.141. [PubMed]

Carrington B, Varshney GK, Burgess SM, Sood R. CRISPR-STAT: an easy and reliable PCR-based method to evaluate target-specific sgRNA activity.  Nucleic Acids Research, doi: 10.1093/nar/gkv802. 2015. [PubMed]

Varshney GK, Pei W, LaFave MC, Idol J, Xu L, Gallardo V, Carrington B, Bishop K, Jones MP, Li M, Harper U, Huang SC, Prakash A, Chen W, Sood R, Ledin J, and Burgess SM. High throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9. Genome Res, 25(7):1030-42. 2015. [PubMed]

Rissone A, Weinacht KG, Marca G, Bishop K, Giocaliere E, Jagadeesh J, Felgentreff K, Dobbs, K, Al-Herz W, Jones MP, Chandrasekharappa S, Kirby M, Wincovitch S, Simon KL, Itan Y, DeVine A, Schlaeger T, Schambach A, Sood R, Notarangelo LD, Candotti F.  Reticular dysgenesis-associated AK2 protects hematopoietic stem and progenitor cell development from oxidative stress.  J Exp Med, 212 (8): 1185-1202. 2015.[PubMed]

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Last Updated: August 26, 2015