Bailey-Wilson Publications

National Human Genome Research Institute

National Institutes of Health
U.S. Department of Health and Human Services


Joan E. Bailey-Wilson, Ph.D.

Co-Chief & Senior Investigator, Computational and Statistical Genomics Branch (CSGB)
Head, Statistical Genetics Section

Selected Publications

Sellers T.A., Bailey-Wilson J.E., Elston R.C., Wilson A.F., Ooi W.L., Rothschild H. Evidence for mendelian inheritance in the pathogenesis of lung cancer. J Nat Cancer Inst, 82:1272-1279. 1990. [PubMed]

Mandal DM, Wilson AF, Elston RC, Weissbecker K, Keats BJ, Bailey-Wilson JE. Effects of misspecification of allele frequencies on the Type I error rate of model-free linkage analysis. Hum Hered, 50:126-132. 2000. [PubMed]

Ho GYF, Bailey-Wilson JE. The transmission/disequilibrium test for linkage on the X chromosome. Am J Hum Genet, 66:1158-1160. 2000. [PubMed]

Bailey-Wilson J.E., Sorant A.J.M., Malley J.D., Presciuttini S., Redner R.A., Severini T.A., Badner J.A., Pajevic S., Jufer R., Baffoe-Bonnie A., Kao L., Doan B.Q., Goldstein J.L., Holmes T.N., Behnemann D., Mandal D.M., Turley T.N., Weissbecker K.A., O'Neill J., Pugh E.W. Comparison of novel and existing methods for detection of linkage disequilibrium using parent-child trios in the GAW12 genetic isolate simulated data. Genet Epidemiol, 21(Suppl 1):S378-383. 2001. [PubMed]

Carpten J, Nupponen N, Isaacs S, Sood R, Robbins C, Xu J, Faruque M, Moses T, Ewing C, Gillanders E, Hu P, Bujnovszky P, Makalowska I, Baffoe-Bonnie A, Faith D, Smith J, Stephan D, Wiley K, Brownstein M, Gildea D, Kelly B, Jenkins R, Hostetter G, Matikainen M, Schleutker J, Klinger K, Connors T, Xiang Y, Wang Z, De Marzo A, Papadopoulos N, Kallioniemi OP, Burk R, Meyers D, Grönberg H, Meltzer P, Silverman R, Bailey-Wilson J, Walsh P, Isaacs W, Trent J. Germline mutations in the ribonuclease L gene in families showing linkage with HPC1. Nat Genet, 30:181-184. 2002. [PubMed]

Bailey-Wilson J.E., Amos C.I., Pinney S.M., Petersen G.M., de Andrade M., Wiest J.S., Fain P., Schwartz A.G., You M., Franklin W., Klein C., Gazdar A., Rothschild H., Mandal D., Coons T., Slusser J., Lee J., Gaba C., Kupert E., Perez A., Zhou X., Zeng D., Liu Q., Zhang Q., Seminara D., Minna J., Anderson M.W. A major lung cancer susceptibility locus maps to chromosome 6q23-25. Am J Hum Genet, 75(3):460-74. 2004. [PubMed]

Stambolian D, Ibay G, Reider L, Dana D, Moy C, Schlifka M, Holmes T, Ciner E, Bailey-Wilson JE. Genomewide linkage scan for myopia susceptibility loci among Ashkenazi Jewish families shows evidence of linkage on chromosome 22q12. Am J Hum Genet, (3):448-59. 2004. [PubMed]

Baffoe-Bonnie AB, Smith JR, Stephan DA, Schleutker J, Carpten JD, Kainu T, Gillanders EM, Matikainen M, Teslovich TM, Tammela T, Sood R, Balshem AM, Scarborough SD, Xu J, William B. Isaacs WB, Trent JM, Kallioniemi O-P, Bailey-Wilson JE. A Major Locus for Hereditary Prostate Cancer in Finland: Localization by Linkage Disequilibrium of a Haplotype in the HPCX Region, Hum Genet, 117: 307-316. 2005. [PubMed]

Doan BQ, Frangakis CE, Shugart YY, Bailey-Wilson JE. Application of the propensity score in a covariate-based linkage analysis of the collaborative study on the genetics of alcoholism. BMC Genetics, 6(Suppl 1):S33. 2005. [PubMed]

Doan B, Sorant AJ, Frangakis C, Bailey-Wilson JE, Shugart YY (2006) Covariate-based linkage analysis: Application of a propensity score as the single covariate consistently improves power to detect linkage. Eur J Hum Genet, (5)31. 2006. [PubMed]

Kim Y, Duggal P, Gillanders EM, Kim H, Bailey-Wilson JE. Examining the effect of linkage disequilib­rium between markers on the Type 1 error rate and power of nonparametric multipoint linkage analysis of two-generation and multigenerational pedigrees in the presence of missing genotype data. Genet Epidemiol, 32:41-51. 2008. [PubMed]

Duggal P, Gillanders EM, Holmes TN, Bailey-Wilson JE. Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies. BMC Genomics, 9:516. 2008. [PubMed]

Liu P, Vikis HG, Wang D, Lu Y, Wang Y, Schwartz AG, Pinney SM, Yang P, de Andrade M, Petersen GM, Wiest JS, Fain PR, Gazdar A, Gaba C, Rothschild H, Mandal D, Coons T, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Wu X, Spitz MR, Eisen T, Houlston RS, Amos CI, Anderson MW, You M. Familial Aggregation of Common Sequence Variants on 15q24-25.1 in Lung Cancer. J Natl Cancer Inst, 100(18):1326-30. 2008. [PubMed]

You M, Wang D, Liu P, Vikis H, James M, Lu Y, Wang Y, Wang M, Chen Q, Jia D, Liu Y, Wen W, Yang P, Sun Z, Pinney SM, Zheng W, Shu XO, Long J, Gao YT, Xiang YB, Chow WH, Rothman N, Petersen GM, de Andrade M, Wu Y, Cunningham JM, Wiest JS, Fain PR, Schwartz AG, Girard L, Gazdar A, Gaba C, Rothschild H, Mandal D, Coons T, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Amos CI, Anderson MW. Fine mapping of chromosome 6q23-25 region in familial lung cancer families reveals RGS17 as a likely candidate gene. Clin Cancer Res, 15(8):2666-74. 2009. [PubMed]
 
Amos CI, Pinney SM, Li Y, Kupert E, Lee J, de Andrade MA, Yang P, Schwartz AG, Fain PR, Gazdar A, Minna J, Wiest J, Zeng D, Rothschild H, Mandal D, You M, Coons T, Gaba C, Bailey-Wilson JE, Anderson MW. A susceptibility locus on chromosome 6q greatly increases lung cancer risk among light and never smokers. Cancer Res, 70:2359-2367. 2010. [PubMed]
 
Simpson CL*, Justice CM*, Krishnan M, Behneman D, Sung H, Cai J, Green T, Lewis D, Wojciechowski R, Wilson AF, Bailey-Wilson JE. Old lessons learned anew: Family-based methods for detecting genes responsible for quantitative and qualitative trait variation in the GAW 17 mini-exome sequence data. BMC Proceedings, 5(Suppl 9):S83. 2011. [PubMed]
 
Xu J, Lange EM, Lu L, Zheng SL, Wang Z, Thibodeau SN, Cannon-Albright LA, Teerlink CC, Camp NJ, Johnson AM, Zuhlke KA, Stanford JL, Ostrander EA, Wiley KE, Isaacs SD, Walsh PC, Maier C, Luedeke M, Vogel W, Schleutker J, Wahlfors T, Tammela T, Schaid D, McDonnell SK, Derycke MS, Cancel-Tassin G, Cussenot O, Wiklund F, Grönberg H, Eeles R, Easton D, Kote-Jarai Z, Whittemore AS, Hsieh CL, Giles GG, Hopper JL, Severi G, Catalona WJ, Mandal D, Ledet E, Foulkes WD, Hamel N, Mahle L, Moller P, Powell I, Bailey-Wilson JE, Carpten JD, Seminara D, Cooney KA, Isaacs WB; International Consortium for Prostate Cancer Genetics. HOXB13 is a susceptibility gene for prostate cancer: results from the International Consortium for Prostate Cancer Genetics (ICPCG). Hum Genet, 132(1):5-14. 2013. [PubMed]
 
Verhoeven VJ, Hysi PG, Wojciechowski R, Fan Q, Guggenheim JA, Höhn R, Macgregor S, Hewitt AW, Nag A, Cheng CY, Yonova-Doing E, Zhou X, Ikram MK, Buitendijk GH, McMahon G, Kemp JP, Pourcain BS, Simpson CL, Mäkelä KM, Lehtimäki T, Kähönen M, Paterson AD, Hosseini SM, Wong HS, Xu L, Jonas JB, Pärssinen O, Wedenoja J, Yip SP, Ho DW, Pang CP, Chen LJ, Burdon KP, Craig JE, Klein BE, Klein R, Haller T, Metspalu A, Khor CC, Tai ES, Aung T, Vithana E, Tay WT, Barathi VA; Consortium for Refractive Error and Myopia (CREAM), Chen P, Li R, Liao J, Zheng Y, Ong RT, Döring A; Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications (DCCT/EDIC) Research Group, Evans DM, Timpson NJ, Verkerk AJ, Meitinger T, Raitakari O, Hawthorne F, Spector TD, Karssen LC, Pirastu M, Murgia F, Ang W; Wellcome Trust Case Control Consortium 2 (WTCCC2), Mishra A, Montgomery GW, Pennell CE, Cumberland PM, Cotlarciuc I, Mitchell P, Wang JJ, Schache M, Janmahasathian S, Jr RP, Lass JH, Chew E, Iyengar SK; Fuchs' Genetics Multi-Center Study Group, Gorgels TG, Rudan I, Hayward C, Wright AF, Polasek O, Vatavuk Z, Wilson JF, Fleck B, Zeller T, Mirshahi A, Müller C, Uitterlinden AG, Rivadeneira F, Vingerling JR, Hofman A, Oostra BA, Amin N, Bergen AA, Teo YY, Rahi JS, Vitart V, Williams C, Baird PN, Wong TY, Oexle K, Pfeiffer N, Mackey DA, Young TL, van Duijn CM, Saw SM, Bailey-Wilson JE, Stambolian D, Klaver CC, Hammond CJ. Genome-wide meta-analyses of multiancestry cohorts identify multiple new susceptibility loci for refractive error and myopia. Nat Genet, 45(3):314-8. 2013. [PubMed]
 
Stambolian D, Wojciechowski R, Oexle K, Pirastu M, Li X, Raffel LJ, Cotch MF, Chew EY, Klein B, Klein R, Wong TY, Simpson CL, Klaver CC, van Duijn CM, Verhoeven VJ, Baird PN, Vitart V, Paterson AD, Mitchell P, Saw SM, Fossarello M, Kazmierkiewicz K, Murgia F, Portas L, Schache M, Richardson A, Xie J, Wang JJ, Rochtchina E; DCCT/EDIC Research Group, Viswanathan AC, Hayward C, Wright AF, Polasek O, Campbell H, Rudan I, Oostra BA, Uitterlinden AG, Hofman A, Rivadeneira F, Amin N, Karssen LC, Vingerling JR, Hosseini SM, Döring A, Bettecken T, Vatavuk Z, Gieger C, Wichmann HE, Wilson JF, Fleck B, Foster PJ, Topouzis F, McGuffin P, Sim X, Inouye M, Holliday EG, Attia J, Scott RJ, Rotter JI, Meitinger T, Bailey-Wilson JE. Meta-analysis of genome-wide association studies in five cohorts reveals common variants in RBFOX1, a regulator of tissue-specific splicing, associated with refractive error. Hum Mol Genet, 1;22(13):2754-64. [PubMed]
 
Dasgupta A, Szymczak S, Moore JH, Bailey-Wilson JE, Malley JD. Risk estimation using probability machines. BioData Min, 7(1):2. 2014. [PubMed]
 
Bureau A, Parker MM, Ruczinski I, Taub MA, Marazita ML, Murray JC, Mangold E, Noethen MM, Ludwig KU, Hetmanski JB, Bailey-Wilson JE, Cropp CD, Li Q, Szymczak S, Albacha-Hejazi H, Alqosayer K, Field LL, Wu-Chou YH, Doheny KF, Ling H, Scott AF, Beaty TH. Whole Exome Sequencing of Distant Relatives in Multiplex Families Implicates Rare Variants in Candidate Genes for Oral Clefts. Genetics,  May 2, 2014. (Epub ahead of print) [PubMed]

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Last Updated: June 19, 2014