Approved Sequencing Targets

National Human Genome Research Institute

National Institutes of Health
U.S. Department of Health and Human Services


Approved Sequencing Targets

Please note: To sort the table by column, click on the link in the header. To review a list and database of the previous approved sequencing targets, see: www.genome.gov/10002154.

Status Approved Sequencing Targets

Center Active / Historical Proposal or Project Name Sub-Project Name Common Name (Species Name), Tumor Type, Phenotype, or Disease Data Type Name registered in dbGap/ BioProject Capacity needed for project (Gb) % sequencing complete Project Finished? Human / Non-Human
WASHU ACTIVE 1000 Genomes Full Scale Whole exome PRJNA28889 7850 100% Yes Human
BAYLOR ACTIVE 1000 Genomes Full Scale Whole exome PRJNA59773 3193 100% Yes Human
WASHU ACTIVE 1000 Genomes Full Scale Whole genome PRJNA28889 5650 100% Yes Human
BAYLOR ACTIVE 1000 Genomes Full Scale Whole genome PRJNA59771 4050 100% Yes Human
BROAD ACTIVE 1000 Genomes Phase 2 Whole exome   100% Yes Human
BROAD ACTIVE 1000 Genomes Phase 2 Whole genome   100% Yes Human
BROAD ACTIVE 1000 Genomes Phase 3 Whole exome   100% Yes Human
BROAD ACTIVE 1000 Genomes Phase 3 Whole genome   100% Yes Human
BROAD ACTIVE 1000 Genomes Phase 3 Validation Whole exome   100% Yes Human
BROAD ACTIVE 1000 Genomes Phase 3 Validation Whole genome   100% Yes Human
BROAD ACTIVE 1000 Genomes Pilot + Phase 1 Whole exome   100% Yes Human
BROAD ACTIVE 1000 Genomes Pilot + Phase 1 Whole genome   100% Yes Human
BAYLOR ACTIVE Age-related Brain MRI & Cognitive Change Whole exome PRJNA252586 24000 93% No Human
WASHU ACTIVE Aggressive Prostate Carcinoma Prostate Cancer Targeted sequencing (non-exome) dbGaP study phs000661 800 51% No Human
WASHU ACTIVE Aggressive Prostate Carcinoma Prostate Cancer Transcriptome, RNA, cDNA dbGaP study phs000661 1250 59% No Human
WASHU ACTIVE Aggressive Prostate Carcinoma Prostate Cancer Whole exome dbGaP study phs000661 10000 96% No Human
WASHU ACTIVE Aggressive Prostate Carcinoma Prostate Cancer Whole genome dbGaP study phs000661 12750 96% No Human
WASHU ACTIVE Allelic Spectrum of Common Disease Age-related macular degeneration Targeted sequencing (non-exome) dbGaP study phs000685 11000 94% No Human
WASHU ACTIVE Allelic Spectrum of Common Disease Diabetes Targeted sequencing (non-exome) PRJNA75933 and dbGaP phs000276 10000 99% No Human
WASHU ACTIVE Allelic Spectrum of Common Disease Diabetes Whole exome PRJNA75933 and dbGaP phs000100/phs00 1000 90% No Human
WASHU ACTIVE Allelic Spectrum of Common Disease Metabolic syndrome Targeted sequencing (non-exome) PRJNA75933 and dbGaP phs000276 19000 96% No Human
WASHU ACTIVE Allelic Spectrum of Common Disease Metabolic syndrome Whole exome PRJNA75933 and dbGaP phs000276 2000 87% No Human
BROAD ACTIVE Allelic Spectrum of Common Disease Schizophrenia Whole exome pHS000473   100% No Human
BROAD ACTIVE Allelic Spectrum of Common Disease Schizophrenia Whole exome 24129 51% No Human
BROAD ACTIVE Allelic Spectrum of Common Disease Schizophrenia Whole genome   6% No Human
BROAD ACTIVE Alzheimer's Disease Sequencing Project Family studies Alzheimer's Disease Whole exome phs000572 Alzheimer's Disease Sequencing Project (ADSP) 32382 99% No Human
BROAD ACTIVE Alzheimer's Disease Sequencing Project Family studies Alzheimer's Disease Whole genome phs000572 Alzheimer's Disease Sequencing Project (ADSP) 21945 100% No Human
BAYLOR ACTIVE Alzheimer's Disease Sequencing Project Full Scale Alzheimer's Disease Whole exome PRJNA205518 17500 99% No Human
BAYLOR ACTIVE Alzheimer's Disease Sequencing Project Full Scale Alzheimer's Disease Whole genome PRJNA205518 19554 100% No Human
WASHU ACTIVE Alzheimer's Disease Sequencing Project Alzheimer's Disease Whole exome PRJNA155369; dbGaP phs000572 39375 53% No Human
WASHU ACTIVE Alzheimer's Disease Sequencing Project Alzheimer's Disease Whole genome PRJNA155369; dbGaP phs000572 22230 99% No Human
BAYLOR ACTIVE Breast Cancer Breast Cancer Transcriptome, RNA, cDNA phs000770.v1.p1 27 100% No Human
BAYLOR ACTIVE Breast Cancer Breast Cancer Whole exome phs000770.v1.p1 885 100% No Human
BAYLOR ACTIVE Breast Cancer Breast Cancer Whole genome phs000770.v1.p1 27 100% No Human
WASHU ACTIVE Breast Cancer Post-Treatment Breast Cancer Targeted sequencing (non-exome) PRJNA89531, phs000472 1000 94% No Human
WASHU ACTIVE Breast Cancer Post-Treatment Breast Cancer Whole genome PRJNA89531, phs000472 5500 96% No Human
WASHU ACTIVE Breast Cancer Susceptibility Breast Cancer Targeted sequencing (non-exome) PRJNA248436 2000 0% No Human
WASHU ACTIVE Breast Cancer Susceptibility Breast Cancer Whole exome PRJNA248436 5200 100% No Human
WASHU ACTIVE Breast Cancers and their Xenotransplants Breast Cancer Targeted sequencing (non-exome) dbGaP study phs000611 150 98% No Human
WASHU ACTIVE Breast Cancers and their Xenotransplants Breast Cancer Whole genome dbGaP study phs000611 7310 100% No Human
BROAD ACTIVE CLL Genomics Chronic Lymphocytic Leukemia Whole exome phs000435.v1.p1 12114 49% No Human
WASHU ACTIVE Cleft Lip Cleft Lip and palate Whole exome phs000625   No Human
BROAD ACTIVE Diabetes Multiethnic Cohort Diabetes Whole exome Multiple   Yes Human
BROAD ACTIVE Early Onset Myocardial Infarction Early Onset Myocardial Infarction Whole exome   69% No Human
WASHU ACTIVE Finn-Seq FINRISK Cohort Cardiometabolic Syndrome Whole exome PRJNA247963 32000 No Human
WASHU ACTIVE Finn-Seq METSIM Cohort Cardiometabolic Syndrome Whole exome PRJNA248458 32000 No Human
BROAD ACTIVE Finnish Alzheimer's Disease Exome Sequencing Alzheimer's Disease Whole exome Will be deposited in EGA   No Human
WASHU ACTIVE GEI GWASeq Cleft Lip Targeted sequencing (non-exome) dbGap phs000625 6000 93% No Human
BAYLOR ACTIVE GEI Studies Colon Cancer Targeted sequencing (non-exome) 5353 100% No Human
BAYLOR ACTIVE GEI Studies Psoriasis Targeted sequencing (non-exome) PRJNA253636 6269 100% No Human
BAYLOR ACTIVE Genetic Architecture of Common Chronic Disease Whole exome PRJNA252586 30000 84% No Human
BAYLOR ACTIVE Genetic Architecture of Common Chronic Disease Whole genome PRJNA252586 19000 45% No Human
WASHU ACTIVE Genome Reference Constortium BACs, clones, linked-pair libraries PRJNA29893 150 4% No Human
BAYLOR ACTIVE Genomic Analysis of Newborns Whole exome 7200 2% No Human
WASHU ACTIVE Genomics of Cyclin E Localization in Breast Cancer Cells Breast Cancer Transcriptome, RNA, cDNA   No Human
WASHU ACTIVE Genomics of Cyclin E Localization in Breast Cancer Cells Breast Cancer Whole genome   No Human
BROAD ACTIVE Germline Cancer Germline Cancer Whole exome   100% No Human
BAYLOR ACTIVE Hepatocellular Carcinoma Hepatocellular Carcinoma Transcriptome, RNA, cDNA PRJNA169342 165 100% No Human
BAYLOR ACTIVE Hepatocellular Carcinoma Hepatocellular Carcinoma Whole exome PRJNA169342 4644 100% No Human
BAYLOR ACTIVE Hepatocellular Carcinoma Hepatocellular Carcinoma Whole genome PRJNA169342 1000 97% No Human
WASHU ACTIVE Hepatocellular Carcinoma Liver Cancer Targeted sequencing (non-exome) PRJNA247815 684 87% No Human
WASHU ACTIVE Hepatocellular Carcinoma Liver Cancer Transcriptome, RNA, cDNA PRJNA247815 2500 96% No Human
WASHU ACTIVE Hepatocellular Carcinoma Liver Cancer Whole genome PRJNA247815 10000 97% No Human
WASHU ACTIVE High Risk Neuroblastoma Neuroblastoma Whole genome   No Human
WASHU ACTIVE Human Microbiome Project 16S Metagenomic Sequencing 16S PRJNA43021, PRJNA48489   No Human
WASHU ACTIVE Human Microbiome Project Reference Genomes Whole genome PRJNA43021, PRJNA28331   No Human
WASHU ACTIVE Human Microbiome Project Shotgun Metagenomic Sequencing Whole genome PRJNA43021, PRJNA43017   No Human
WASHU ACTIVE Human Microbiome Project Transcriptome Sequencing Transcriptome, RNA, cDNA PRJNA43021   No Human
WASHU ACTIVE Human Microbiome Project Virus Reference Genomes Whole genome PRJNA43021, PRJNA28331   No Human
BAYLOR ACTIVE Hydroxyurea in Sickle Cell Disease Sickle Cell Whole exome PRJNA232740 4800 72% No Human
BAYLOR ACTIVE Hydroxyurea in Sickle Cell Disease Sickle Cell Whole genome PRJNA232740 1127 100% No Human
BROAD ACTIVE IBD IBD Whole exome   No Human
WASHU ACTIVE Lung Adenocarcinoma in Never Smokers Lung Cancer (Never Smokers) Whole exome PRJNA247969   No Human
WASHU ACTIVE Lung Cancer Susceptibility in Smokers Lung Cancer (Smokers) Whole exome PRJNA242215 2000 13% No Human
WASHU ACTIVE Male Infertility Male Infertility Targeted sequencing (non-exome) PRJNA247999 2700 97% No Human
BROAD ACTIVE Mendelian Consortium Hirschsprung_Disease Whole exome phs000497.v1.p1   100% No Human
BROAD ACTIVE Mendelian Consortium Human Hematopoiesis Genetics Whole exome phs000474.v1.p1   100% No Human
BROAD ACTIVE Mendelian Consortium Inherited Muscle Disease Whole exome phs000655.v1.p1 (North); in progress for other cohorts   81% No Human
BROAD ACTIVE Microbial transmissions within human communities (Fiji Comparative) Microbial transmissions within human communities 16S PRJNA217052   100% No Human
BAYLOR ACTIVE Mining of Legacy Samples Whole exome 9600 76% No Human
WASHU ACTIVE Molecular Basis of Breast Cancer Breast Cancer Transcriptome, RNA, cDNA PRJNA247967 2280 1% No Human
WASHU ACTIVE Molecular Basis of Breast Cancer Breast Cancer Whole genome PRJNA247967 20000 1% No Human
BROAD ACTIVE NIMH/NHGRI Autism Project Autism Whole exome phs000298.v1.p1 56000 22% No Human
WASHU ACTIVE Neoadjuvant Trastuzumab Response in Breast Cancer Breast Cancer Transcriptome, RNA, cDNA PRJNA252719 1000 0% No Human
WASHU ACTIVE Neoadjuvant Trastuzumab Response in Breast Cancer Breast Cancer Whole genome PRJNA252719 17000 0% No Human
BROAD ACTIVE Neurodevelopmental Disorders ciliopathies ciliopathies Whole exome phs000288.v1.p1   99% No Human
BAYLOR ACTIVE Obesity and Diabetes Familial Risk Obesity and Diabetes Whole exome PRJNA190072 4152 100% No Human
BAYLOR ACTIVE Pancreatic Cancer Pancreas Whole exome PRJNA171808 3539 100% No Human
BAYLOR ACTIVE Piloting Discovery of Mendelian Disease Mendelian Disease Whole exome 2821 100% Yes Human
WASHU ACTIVE Progression of Relapsed Small Cell Lung Cancer Lung Cancer Transcriptome, RNA, cDNA PRJNA248450 1950 22% No Human
WASHU ACTIVE Progression of Relapsed Small Cell Lung Cancer Lung Cancer Whole exome PRJNA248450 825 53% No Human
BAYLOR ACTIVE Rare Cancer Multiple tumor types Transcriptome, RNA, cDNA PRJNA241050 259 100% No Human
BAYLOR ACTIVE Rare Cancer Multiple tumor types Whole exome PRJNA241050 9000 45% No Human
WASHU ACTIVE Rare Human Phenotypes Rare Human Phenotypes Whole exome PRJNA247989 400 0% No Human
BROAD ACTIVE Resistance and Response Resistance Bladder cancer Whole exome 651 100% No Human
BROAD ACTIVE Resistance and Response Resistance Breast cancer Transcriptome, RNA, cDNA   No Human
BROAD ACTIVE Resistance and Response Resistance Breast cancer Whole exome 588 94% No Human
BROAD ACTIVE Resistance and Response Resistance Breast cancer Whole exome   No Human
BROAD ACTIVE Resistance and Response Resistance Colorectal cancer Transcriptome, RNA, cDNA 49 0% No Human
BROAD ACTIVE Resistance and Response Resistance Colorectal cancer Whole exome 70 0% No Human
BROAD ACTIVE Resistance and Response Resistance Lung cancer Transcriptome, RNA, cDNA 14 0% No Human
BROAD ACTIVE Resistance and Response Resistance Lung cancer Whole exome 35 0% No Human
BROAD ACTIVE Resistance and Response Resistance Melanoma Transcriptome, RNA, cDNA phs000452 Melanoma Sequencing Project 77 100% No Human
BROAD ACTIVE Resistance and Response Resistance Melanoma Transcriptome, RNA, cDNA phs000452 Melanoma Sequencing Project 189 96% No Human
BROAD ACTIVE Resistance and Response Resistance Melanoma Transcriptome, RNA, cDNA phs000452 Melanoma Sequencing Project 1050 0% No Human
BROAD ACTIVE Resistance and Response Resistance Melanoma Whole exome phs000452 Melanoma Sequencing Project 1036 100% No Human
BROAD ACTIVE Resistance and Response Resistance Melanoma Whole exome phs000452 Melanoma Sequencing Project 2100 0% No Human
BROAD ACTIVE Resistance and Response Resistance Melanoma Whole exome phs000452 Melanoma Sequencing Project 154 100% No Human
BROAD ACTIVE Resistance and Response Resistance Renal cell carcinoma Transcriptome, RNA, cDNA   No Human
BROAD ACTIVE Resistance and Response Resistance Renal cell carcinoma Whole exome 126 0% No Human
BROAD ACTIVE Resistance and Response Resistance Testicular cancer Whole exome 539 0% No Human
WASHU ACTIVE Resistance in Non-small Cell Lung Cancer Lung Cancer Targeted sequencing (non-exome) PRJNA248470 150 30% No Human
WASHU ACTIVE Resistance in Non-small Cell Lung Cancer Lung Cancer Transcriptome, RNA, cDNA PRJNA248470 1950 No Human
WASHU ACTIVE Resistance in Non-small Cell Lung Cancer Lung Cancer Whole genome PRJNA248470 13500 17% No Human
WASHU ACTIVE Sickle Cell Disease Sickle Cell Patients with Strokes Whole exome PRJNA247991 3800 4% No Human
BAYLOR ACTIVE South African Schizophrenia Schizophrenia Whole exome 6000 4% No Human
WASHU ACTIVE Spontaneous Amyotrophic Lateral Sclerosis (ALS) Spontaneous Amyotrophic Lateral Sclerosis (ALS) Targeted sequencing (non-exome) PRJNA248442 250 76% No Human
WASHU ACTIVE Spontaneous Amyotrophic Lateral Sclerosis (ALS) Spontaneous Amyotrophic Lateral Sclerosis (ALS) Transcriptome, RNA, cDNA PRJNA248442 1000 74% No Human
WASHU ACTIVE Spontaneous Amyotrophic Lateral Sclerosis (ALS) Spontaneous Amyotrophic Lateral Sclerosis (ALS) Whole genome PRJNA248442 3900 96% No Human
BAYLOR ACTIVE TCGA Breast Benchmark Breast Transcriptome, RNA, cDNA PRJNA74949 61 100% No Human
BAYLOR ACTIVE TCGA Breast Benchmark Breast Whole genome PRJNA74949 427 100% No Human
BROAD ACTIVE TCGA TCGA Whole Genome Sequencing Multiple Tumor Types Whole genome cgHUB 85580 100% No Human
BAYLOR ACTIVE TCGA Adrenocortical carcinoma Whole exome PRJNA74949 1835 100% No Human
BAYLOR ACTIVE TCGA B-cell Lymphoma Whole exome PRJNA74949 9000 6% No Human
BAYLOR ACTIVE TCGA B-cell Lymphoma Whole genome PRJNA74949 2182 100% No Human
WASHU ACTIVE TCGA Breast Targeted sequencing (non-exome) PRJNA74949 800 73% No Human
WASHU ACTIVE TCGA Breast Whole exome PRJNA74949 19500 86% No Human
WASHU ACTIVE TCGA Breast Whole genome PRJNA74949 29000 47% No Human
WASHU ACTIVE TCGA Cervical Targeted sequencing (non-exome) PRJNA74949 50 2% No Human
WASHU ACTIVE TCGA Cervical Whole exome PRJNA74949 4000 74% No Human
WASHU ACTIVE TCGA Cervical Whole genome PRJNA74949 6000 100% No Human
BAYLOR ACTIVE TCGA Colon Whole exome PRJNA74949 14314 100% Yes Human
BAYLOR ACTIVE TCGA Colon Whole genome PRJNA74949 15000 99% Yes Human
WASHU ACTIVE TCGA Endometrial Targeted sequencing (non-exome) PRJNA74949 1500 41% No Human
WASHU ACTIVE TCGA Endometrial Whole exome PRJNA74949 11000 61% No Human
WASHU ACTIVE TCGA Endometrial Whole genome PRJNA74949 16000 62% No Human
WASHU ACTIVE TCGA Esophageal Whole exome PRJNA74949 5000 0% No Human
WASHU ACTIVE TCGA Esophageal Whole genome PRJNA74949 6300 0% No Human
WASHU ACTIVE TCGA GBM Whole genome PRJNA74949 6000 64% No Human
BAYLOR ACTIVE TCGA Head and Neck Whole genome PRJNA74949 12214 100% Yes Human
BAYLOR ACTIVE TCGA Kidney Chromophobe Whole exome PRJNA74949 1312 100% Yes Human
BAYLOR ACTIVE TCGA Kidney Chromophobe Whole genome PRJNA74949 4821 100% Yes Human
BAYLOR ACTIVE TCGA Kidney Papillary Whole exome PRJNA74949 2250 72% No Human
BAYLOR ACTIVE TCGA Kidney Papillary Whole genome PRJNA74949 3418 100% No Human
BAYLOR ACTIVE TCGA Liver Whole exome PRJNA74949 9000 62% No Human
BAYLOR ACTIVE TCGA Liver Whole genome PRJNA74949 16000 17% No Human
WASHU ACTIVE TCGA Ovarian Targeted sequencing (non-exome) PRJNA74949 200 83% No Human
WASHU ACTIVE TCGA Ovarian Whole exome PRJNA74949 8600 100% No Human
BAYLOR ACTIVE TCGA Ovarian Whole genome PRJNA74949 6000 91% Yes Human
WASHU ACTIVE TCGA Ovarian Whole genome PRJNA74949 50 84% No Human
BAYLOR ACTIVE TCGA Rectal Whole exome PRJNA74949 5000 93% Yes Human
BAYLOR ACTIVE TCGA Rectal Whole genome PRJNA74949 4655 100% Yes Human
BAYLOR ACTIVE TCGA Renal Whole exome PRJNA74949 7049 100% Yes Human
BAYLOR ACTIVE TCGA Renal Whole genome PRJNA74949 16200 68% Yes Human
WASHU ACTIVE TCGA Sarcoma Whole exome PRJNA74949 5000 68% No Human
WASHU ACTIVE TCGA Sarcoma Whole genome PRJNA74949 16500 61% No Human
WASHU ACTIVE Transition from Pre-Invasive to Invasive Cervical Cancer Cervical Whole genome   No Human
WASHU ACTIVE Treatment Response and Survival in Prostate Cancer Prostate Cancer Transcriptome, RNA, cDNA   No Human
WASHU ACTIVE Tumor Sequencing Project AML Targeted sequencing (non-exome) PRJNA74781, phs000159.v4.p2 800 74% No Human
WASHU ACTIVE Tumor Sequencing Project AML Transcriptome, RNA, cDNA PRJNA74781, phs000159.v4.p2 600 87% No Human
WASHU ACTIVE Tumor Sequencing Project AML Whole exome PRJNA74781, phs000159.v4.p2 50 76% No Human
WASHU ACTIVE Tumor Sequencing Project AML Whole genome PRJNA74781, phs000159.v4.p2 3000 82% No Human
BROAD ACTIVE Tumor Sequencing Project Aggressive Prostate Carcinoma Transcriptome, RNA, cDNA phs000447.v1.p1 (Prostate Cancer Genome Sequencing Project)   No Human
BROAD ACTIVE Tumor Sequencing Project Aggressive Prostate Carcinoma Whole genome phs000447   No Human
BROAD ACTIVE Tumor Sequencing Project Brain Mets Whole exome 4950 48% No Human
BROAD ACTIVE Tumor Sequencing Project Brain Mets Whole exome 2304 67% No Human
WASHU ACTIVE Tumor Sequencing Project Breast Cancer Targeted sequencing (non-exome) PRJNA89531 1500 93% No Human
WASHU ACTIVE Tumor Sequencing Project Breast Cancer Transcriptome, RNA, cDNA PRJNA89531 50 36% No Human
WASHU ACTIVE Tumor Sequencing Project Breast Cancer Whole exome PRJNA89531 100 62% No Human
WASHU ACTIVE Tumor Sequencing Project Breast Cancer Whole genome PRJNA89531 19000 96% No Human
BROAD ACTIVE Tumor Sequencing Project Breast cancer: epidemiology Whole exome   No Human
BROAD ACTIVE Tumor Sequencing Project Colon cancer: epidemiology Whole exome phs000722.v1.p1 22200 4% No Human
BROAD ACTIVE Tumor Sequencing Project Esophageal Adenocarcinoma Whole exome phs000598.v2.p2 Exome Sequencing of Esophageal Adenocarcinoma   Yes Human
BROAD ACTIVE Tumor Sequencing Project Melanoma, Uveal Whole exome phs000452 1387 78% No Human
BROAD ACTIVE Tumor Sequencing Project Mesothelioma Whole exome 555 100% No Human
BROAD ACTIVE Tumor Sequencing Project Prostate Cancer in African Americans Whole exome phs000447 3241 39% No Human
BROAD ACTIVE Tumor Sequencing Project Prostate Cancer in African Americans Whole exome phs000447   No Human
BROAD ACTIVE Tumor Sequencing Project Prostate Cancer, Small Cell Whole exome   No Human
BROAD ACTIVE Type 2 Diabetes Exome Sequencing Diabetes Whole exome   100% No Human
BAYLOR ACTIVE 200 Mammals Killer whale (Orcinus orca) Whole genome PRJNA167475 122 100% Yes Non-Human
BAYLOR ACTIVE 200 Mammals Walrus (Odobenus rosmarus) Whole genome PRJNA167474 600 100% Yes Non-Human
BAYLOR ACTIVE Adder Snake Adder Snake (Vipera berus) Whole genome PRJNA170536 119 100% No Non-Human
WASHU ACTIVE Anthelmintic Resistance in Parasitic Nematodes Drug resistant isolates of Cooperia punctata Cooperia punctata Transcriptome, RNA, cDNA PRJNA219635 100 39% No Non-Human
WASHU ACTIVE Anthelmintic Resistance in Parasitic Nematodes Drug resistant isolates of Necator americanus New World hookworm (Necator americanus) Whole genome PRJNA219639 100 100% No Non-Human
WASHU ACTIVE Anthelmintic Resistance in Parasitic Nematodes Drug resistant isolates of Telodorsagia circumcincta Brown stomach worm (Telodorsagia circumcincta) Whole genome PRJNA219637 100 65% No Non-Human
BROAD ACTIVE Canine Tumor Sequencing - Pilot Project Lymphoma Canis familiaris/Dog Whole exome PRJNA247491   No Non-Human
BROAD ACTIVE Canine Tumor Sequencing - Pilot Project Lymphoma Canis familiaris/Dog Whole genome PRJNA247491   100% No Non-Human
BROAD ACTIVE Canine Tumor Sequencing - Pilot Project Melanoma Canis familiaris/Dog Whole exome PRJNA247491   No Non-Human
BROAD ACTIVE Canine Tumor Sequencing - Pilot Project Osteosarcoma Canis familiaris/Dog Whole exome PRJNA247491   No Non-Human
BROAD ACTIVE Canine Tumor Sequencing - Pilot Project Osteosarcoma Canis familiaris/Dog Whole genome PRJNA247491   100% No Non-Human
WASHU ACTIVE Community Aquired MRSA Infection CA-MRSA Whole exome PRJNA247964 5000 31% No Non-Human
WASHU ACTIVE Community Aquired MRSA Infection MRSA Bacteria Whole genome PRJNA247964 1100 2% No Non-Human
BROAD ACTIVE Defining the Transcriptome of Nine Vertebrate Genomes Using RNA-Seq Multiple Transcriptome, RNA, cDNA Multiple   Yes Non-Human
BROAD ACTIVE Dog Canis familiaris/Dog BACs, clones, linked-pair libraries   100% No Non-Human
WASHU ACTIVE Ecdysozoan Sequencing Marine Worm (Priapulus caudatus) Transcriptome, RNA, cDNA PRJNA20497 50 12% No Non-Human
WASHU ACTIVE Ecdysozoan Sequencing Marine Worm (Priapulus caudatus) Whole genome PRJNA20497 200 72% No Non-Human
BAYLOR ACTIVE Echinoderm Sequencing Brittle Star Genome Spiny brittle star (Ophiothrix spiculata) Whole genome PRJNA182997 340 100% No Non-Human
BAYLOR ACTIVE Echinoderm Sequencing Green Sea Urchin Genome Green Sea urchin (Lytechinus variegatus) Whole genome PRJNA62399 40 100% No Non-Human
BAYLOR ACTIVE Echinoderm Sequencing Sea Cucumber Genome Warty Sea Cucumber (Parastichopus parvimensis) Whole genome PRJNA182998 190 100% No Non-Human
BROAD ACTIVE Evolution of the Human Proteome Latimeria chalumnae/Coelacanth Whole genome PRJNA56111   100% No Non-Human
BROAD ACTIVE Evolution of the Human Proteome Lepisosteus oculatus/Spotted gar Transcriptome, RNA, cDNA PRJNA247500   100% No Non-Human
BROAD ACTIVE Evolution of the Human Proteome Lepisosteus oculatus/Spotted gar Whole genome PRJNA68247   100% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Blood Fluke (Schistosoma mansoni) Transcriptome, RNA, cDNA PRJNA247810 80 2% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Human lung fluke (Paragonimus westermani) Whole genome PRJNA219632 150 16% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Liver fluke (Opisthorchis viverrini) Whole genome PRJNA230518 100 16% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Lung fluke (Paragonimus kellicotti) Whole genome PRJNA179523 250 91% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Lung fluke (Paragonimus miyazakii) Transcriptome, RNA, cDNA PRJNA245325 100 59% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Lung fluke (Paragonimus miyazakii) Whole genome PRJNA245325 100 34% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Sheep liver fluke (Fasciola gigantica) Whole genome PRJNA230515 150 36% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Sheep liver fluke (Fasciola hepatica) Transcriptome, RNA, cDNA PRJNA179522 50 76% No Non-Human
WASHU ACTIVE Food-Bourne Trematodiases Sheep liver fluke (Fasciola hepatica) Whole genome PRJNA179522 400 94% No Non-Human
BROAD ACTIVE Fungal Genome Initiative Black Yeasts Whole genome PRJNA76691   42% No Non-Human
BROAD ACTIVE Fungal Genome Initiative Cryptococcus neoformans, serotype A and B Whole genome PRJNA89741?   100% No Non-Human
WASHU ACTIVE Genetic Model for Vertebrate Development Common Garter Snake (Thamnophis sirtalis) Transcriptome, RNA, cDNA PRJNA189551 200 0% No Non-Human
WASHU ACTIVE Genetic Model for Vertebrate Development Common Garter Snake (Thamnophis sirtalis) Whole genome PRJNA189551 400 85% No Non-Human
BAYLOR ACTIVE Genetic Variation in Essential Laboratory Primates Rhesus Macaque (Macaca mulatta) and Cynomolgus Macaque (Macaca fascicularis) Whole exome PRJNA251548  156 100% No Non-Human
BAYLOR ACTIVE Genetic Variation in Essential Laboratory Primates Rhesus Macaque (Macaca mulatta) and Cynomolgus Macaque (Macaca fascicularis) Whole genome PRJNA251548  11909 100% No Non-Human
BROAD ACTIVE Genomic Basis of Vertebrate Diversity Gasterosteus aculeatus/Stickleback Whole genome PRJNA247503   100% No Non-Human
WASHU ACTIVE Hookworm New World hookworm (Necator americanus Anhui) Transcriptome, RNA, cDNA PRJNA72135 25 76% No Non-Human
WASHU ACTIVE Hookworm New World hookworm (Necator americanus Anhui) Whole genome PRJNA72135 50 46% No Non-Human
WASHU ACTIVE Host Immunological Markers Transcriptome, RNA, cDNA 750 No Non-Human
WASHU ACTIVE Host Parasite Interaction Transcriptome, RNA, cDNA 150 No Non-Human
BROAD ACTIVE Human Microbiome Project Human Microbiome Project -Eukaryotes Reference Genomes Whole genome SRA STOOL06P6B   100% No Non-Human
BAYLOR ACTIVE I5K Multiple species Transcriptome, RNA, cDNA PRJNA163973 600 52% No Non-Human
BAYLOR ACTIVE I5K Multiple species Whole genome PRJNA163973 4953 100% No Non-Human
BAYLOR ACTIVE Identification of Mutation in a Rat Model for Human Parkinson?s Disease Parkinson's Disease Whole genome PRJNA253728 475 100% No Non-Human
WASHU ACTIVE Infectious Disease Genomics Initiative BK Virus Nephropathy Whole genome 100 No Non-Human
WASHU ACTIVE Infectious Disease Genomics Initiative Clostridium difficile Hospital Infection Control Clostridium difficile Whole genome 1600 22% No Non-Human
WASHU ACTIVE Infectious Disease Genomics Initiative Influenza A Influenza A Whole genome 100 0% No Non-Human
WASHU ACTIVE Infectious Disease Genomics Initiative Influenza B Influenza B Whole genome 100 1% No Non-Human
WASHU ACTIVE Infectious Disease Genomics Initiative RBEL Microbiome Whole genome 100 No Non-Human
WASHU ACTIVE Infectious Disease Genomics Initiative Rotavirus Whole genome 100 No Non-Human
WASHU ACTIVE Infectious Disease Genomics Initiative Short Bowel Microbiome Whole genome 100 No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers Genetic Model for Oral Cancer Oral Cancer Whole exome PRJNA247825 90 89% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers Inducible Mouse Models of Human Colon Cancer Colon Cancer Transcriptome, RNA, cDNA PRJNA247961 1200 34% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers Inducible Mouse Models of Human Colon Cancer Colon Cancer Whole genome PRJNA247961 6000 81% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers Murine STAT1 deficient ER positive Luminal Mammary Tumors Breast Cancer Whole genome PRJNA248457 8000 85% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers TP53 Knock out Models of Human Breast Cancer Breast Cancer Whole exome PRJNA247955 350 81% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers TP53 Knock out Models of Human Breast Cancer Breast Cancer Whole genome PRJNA247955 1000 95% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers 2 Mouse Models of Sarcoma Targeting Kras and p53 Sarcoma Targeted sequencing (non-exome) PRJNA248466 100 52% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers 2 Mouse Models of Sarcoma Targeting Kras and p53 Sarcoma Transcriptome, RNA, cDNA PRJNA248466 100 35% No Non-Human
WASHU ACTIVE Mouse Models of Human Cancers 2 Mouse Models of Sarcoma Targeting Kras and p53 Sarcoma Whole exome PRJNA248466 640 5% No Non-Human
WASHU ACTIVE Mouse Models of Lung Cancer Lung Cancer Whole genome   No Non-Human
BROAD ACTIVE Mouse Models of colitis Mouse Models of colitis Whole genome PRJNA176009   100% No Non-Human
BROAD ACTIVE Mouse Mutant Resequencing Initiative Mus musculus/Mouse Targeted sequencing (non-exome) PRJNA247497   No Non-Human
BROAD ACTIVE Mouse Mutant Resequencing Initiative Mus musculus/Mouse Whole exome PRJNA247497 546 56% No Non-Human
BROAD ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Elephant diversity project Loxodonta africana/Elephant Whole genome PRJNA247496   100% No Non-Human
BROAD ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Elephant reference genome Loxodonta africana/Elephant Whole genome PRJNA12569   100% No Non-Human
BROAD ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Rabbit diversity project Oryctolagus cuniculus/Rabbit Whole genome PRJNA242290   100% No Non-Human
BROAD ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Rabbit reference genome Oryctolagus cuniculus/Rabbit Whole genome PRJNA12819   100% No Non-Human
BAYLOR ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Top-up of Remaining 2X Mammals Megabat (Pteropus vampyrus) Whole genome PRJNA20325   100% No Non-Human
BAYLOR ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Top-up of Remaining 2X Mammals Ord's kangaroo rat (Dipodomys ordii) Whole genome PRJNA20385 346 100% No Non-Human
BAYLOR ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Top-up of Remaining 2X Mammals Rock Hyrax (Procavia capensis) Whole genome PRJNA13972 474 100% No Non-Human
WASHU ACTIVE Multiple Mammalian Genomes for Comparative Genome Annotation Flying Lemur (Galeopterus variegatus) Transcriptome, RNA, cDNA PRJNA20511 30 No Non-Human
BROAD ACTIVE Origins of multicellularity Amoebidium parasiticum Amoebidium parasiticum Whole genome PRJNA189477   100% No Non-Human
BROAD ACTIVE Origins of multicellularity Ministeria vibrans Ministeria vibrans Whole genome PRJNA39421 20 100% No Non-Human
BROAD ACTIVE Origins of multicellularity Allomyces macrogynus, Spizellomyces punctatus, Mortierella verticillata, Sphaeroforma arctica, Capsaspora owczarzaki, Thecamonas trahens, Salpingoeca rosetta, Fonticula alba Whole genome PRJNA20563, PRJNA37881, PRJNA20603, PRJNA20463, PRJNA20341, PRJNA37929, PRJNA37927, PRJNA189482,   100% No Non-Human
WASHU ACTIVE Parasitic Nematode Glands Transcriptome, RNA, cDNA 4 32% No Non-Human
WASHU ACTIVE Pathogen Genomics and Global Health Metagenomics 16S 10 No Non-Human
WASHU ACTIVE Pathogen Genomics and Global Heath Ascaris lumbricoides Whole genome PRJNA230513 40 77% No Non-Human
WASHU ACTIVE Pathogen Genomics and Global Heath Helminths Infections Whole genome 1000 No Non-Human
WASHU ACTIVE Pathogen Genomics and Global Heath Onchocerca flexuosa Whole genome PRJNA230512 20 66% No Non-Human
WASHU ACTIVE Pathogen Genomics and Global Heath Onchocerca volvulus Whole genome PRJNA219638 150 87% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tetse Fly (Glossina austeni) Whole genome PRJNA189552 100 60% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tetse Fly (Glossina brevipalpis) Transcriptome, RNA, cDNA PRJNA182187 100 75% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tetse Fly (Glossina brevipalpis) Whole genome PRJNA182187 100 57% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tetse Fly (Glossina fuscipes) Whole genome PRJNA172853 400 81% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tetse Fly (Glossina pallidipes) Transcriptome, RNA, cDNA PRJNA184812 50 0% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tetse Fly (Glossina pallidipes) Whole genome PRJNA184812 100 45% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tsetse Fly (multiple Glossina) Transcriptome, RNA, cDNA PRJNA188117, PRJNA189552, PRJNA182187, PRJNA172853, PRJNA184812 300 87% No Non-Human
WASHU ACTIVE Pathogens and Vectors Glossina Genome Projects Tsetse Fly (multiple Glossina) Whole genome PRJNA188117, PRJNA189552, PRJNA182187, PRJNA172853, PRJNA184812 500 52% No Non-Human
WASHU ACTIVE Pathogens and Vectors Pathogenomics of Trypanosomatid parasites Trypanosomatid parasites Whole genome PRJNA176381, PRJNA165885, PRJNA59941, PRJNA50301, PRJNA165959, PRJNA169673, PRJNA50299, PRJNA165955, PRJNA169676, PRJNA169675, PRJNA165953, PRJNA169677, PRJNA50303, PRJNA50493, PRJNA192710, PRJNA192711, PRJNA192717, PRJNA165887, PRJNA192703, PRJNA192712, PRJNA198812 400 40% No Non-Human
BROAD ACTIVE Pathogens and Vectors Genome Analysis of Vectorial Capacity in Major Anopheles Vectors of Malaria Parasites Whole genome PRJNA67129   100% No Non-Human
WASHU ACTIVE Pathogens and Vectors Sand Fly (Phlebotomus bergeroti) Whole genome PRJNA252709 30 51% No Non-Human
WASHU ACTIVE Pathogens and Vectors Sand Fly (Phlebotomus duboscqi) Whole genome PRJNA252711 30 55% No Non-Human
WASHU ACTIVE Pathogens and Vectors Sand Fly (Phlebotomus papatasi) Transcriptome, RNA, cDNA PRJNA20293 100 63% No Non-Human
WASHU ACTIVE Pathogens and Vectors Sand Fly (Phlebotomus papatasi) Whole genome PRJNA20293 150 94% No Non-Human
WASHU ACTIVE Pathogens and Vectors Stable Fly (Stomoxys calcitrans) Transcriptome, RNA, cDNA PRJNA188117 100 39% No Non-Human
WASHU ACTIVE Pathogens and Vectors Stable Fly (Stomoxys calcitrans) Whole genome PRJNA188117 200 87% No Non-Human
BROAD ACTIVE Prairie Vole Microtus ochrogaster/Prairie vole Whole genome PRJNA72443   100% No Non-Human
BAYLOR ACTIVE Primate Genomes Buff-headed Capuchin Reference Genome Buff-headed capuchin (Cebus xanthrosternos) Whole genome PRJNA249084  600 0% No Non-Human
BAYLOR ACTIVE Primate Genomes Colobus Reference Genome Black colobus (Colobus angolensis) Whole genome PRJNA251421 600 86% No Non-Human
BAYLOR ACTIVE Primate Genomes Drill Reference Genome Drill (Mandrillus leucophaeus) Whole genome PRJNA251423 1000 33% No Non-Human
BAYLOR ACTIVE Primate Genomes Gelada Monkey Reference Genome Gelada monkey (Theropithecus gelada) Whole genome PRJNA251424 600 0% No Non-Human
BAYLOR ACTIVE Primate Genomes Mouse Lemur Diversity Panel Gray mouse lemur (Microcebus murinus) Whole genome PRJNA19967 835 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Mouse Lemur Reference Genome Gray mouse lemur (Microcebus murinus) Whole genome PRJNA19967 465 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Owl Monkey Reference Genome Owl monkey (Aotus nancymaae) Whole genome PRJNA251539  600 0% No Non-Human
BAYLOR ACTIVE Primate Genomes Patas monkey Reference Genome Patas monkey (Erythrocebus patas) Whole genome PRJNA251426  600 0% No Non-Human
BAYLOR ACTIVE Primate Genomes Pig-tailed Macaque Diversity Panel Pig-tailed Macaque (Macaca nemestrina) Whole genome PRJNA251427 458 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Pig-tailed Macaque Reference Genome Pig-tailed Macaque (Macaca nemestrina) Whole genome PRJNA251427 628 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Primate RNAseq Survey Multiple species Transcriptome, RNA, cDNA PRJNA251544 2411 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Sifaka Lemur Diversity Panel Sifaka Lemur (Propithecus coquereli) Whole genome PRJNA251429 749 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Sifaka Lemur Reference Genome Sifaka Lemur (Propithecus coquereli) Whole genome PRJNA251429 592 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Sooty Mangabey Diversity Panel Sooty Mangabey (Cercocebus atys) Whole genome PRJNA157077 728 100% No Non-Human
BAYLOR ACTIVE Primate Genomes Sooty Mangabey Reference Genome Sooty mangabey (Cercocebus atys) Whole genome PRJNA157077 241 100% No Non-Human
BAYLOR ACTIVE Primate Genomes White-fronted Capuchin Reference Genome White-fronted capuchin (Cebus albifrons) Whole genome PRJNA251434 600 0% No Non-Human
WASHU ACTIVE Primate Genomes Tarsier (Tarsier syrichta) Transcriptome, RNA, cDNA PRJNA20339 50 15% No Non-Human
WASHU ACTIVE Primate Genomes Vervet (Chlorocebus aethiops) Whole genome PRJNA176010, PRJNA168527, PRJNA168621, PRJNA168522, PRJNA168521, PRJNA168520, PRJNA168472 9000 98% No Non-Human
BROAD ACTIVE Sea slug Aplysia californica Transcriptome, RNA, cDNA PRJNA77701   100% No Non-Human
BROAD ACTIVE Sea slug Aplysia californica Whole genome PRJNA13635   100% No Non-Human
WASHU ACTIVE Strongylid Nematode Bovine Lungworm (Dictyocaulus viviparus) Transcriptome, RNA, cDNA PRJNA72587 155 77% No Non-Human
WASHU ACTIVE Strongylid Nematode Bovine Lungworm (Dictyocaulus viviparus) Whole genome PRJNA72587 100 37% No Non-Human
WASHU ACTIVE Strongylid Nematode Bovine Stomach Worm (Ostertagia ostertagi) Transcriptome, RNA, cDNA PRJNA72577 18 56% No Non-Human
WASHU ACTIVE Strongylid Nematode Bovine Stomach Worm (Ostertagia ostertagi) Whole genome PRJNA72577 200 70% No Non-Human
WASHU ACTIVE Strongylid Nematode Intestinal Hookworm (Ancylostoma ceylanicum) Transcriptome, RNA, cDNA PRJNA12860 400 77% No Non-Human
WASHU ACTIVE Strongylid Nematode Nodule Worm (Oesophagostomum dentatum) Transcriptome, RNA, cDNA PRJNA72579, PRJNA20459 120 97% No Non-Human
WASHU ACTIVE Strongylid Nematode Nodule Worm (Oesophagostomum dentatum) Whole genome PRJNA72579, PRJNA20459 125 60% No Non-Human
WASHU ACTIVE Strongylid Nematode Small intestinal worm (Cooperia oncophora) Transcriptome, RNA, cDNA PRJNA20299, PRJNA188323 50 36% No Non-Human
WASHU ACTIVE Strongylid Nematode Small intestinal worm (Cooperia oncophora) Whole genome PRJNA20299, PRJNA72571 140 68% No Non-Human
WASHU ACTIVE Strongylid Nematode Thread-Necked Worm (Nematodirus battus) Whole genome PRJNA20455, PRJNA86621 100 36% No Non-Human
WASHU ACTIVE Synovial and Clear Cell Sarcoma Mouse Models Sarcoma Targeted sequencing (non-exome) PRJNA247995 50 0% No Non-Human
WASHU ACTIVE Synovial and Clear Cell Sarcoma Mouse Models Sarcoma Transcriptome, RNA, cDNA PRJNA247995 250 0% No Non-Human
WASHU ACTIVE Synovial and Clear Cell Sarcoma Mouse Models Sarcoma Whole exome PRJNA247995 1200 0% No Non-Human
BROAD ACTIVE Tetrahymena comparative genome project Tetrahymena thermophila, Tetrahymena elliotti, Tetrahymena borealis, Tetrahymena malaccensis Whole genome PRJNA177802   100% No Non-Human
BROAD ACTIVE Tilapia cichlid Multiple Transcriptome, RNA, cDNA Multiple   100% No Non-Human
BROAD ACTIVE Tilapia cichlid Multiple Whole genome Multiple   100% No Non-Human
BROAD ACTIVE Trichophyton T. rubrum Whole genome PRJNA186851   100% No Non-Human
BAYLOR HISTORICAL 1000 Genomes Pilot 1 Whole genome PRJNA28911   Yes Human
BAYLOR HISTORICAL 1000 Genomes Pilot 2 Whole genome PRJNA28919   Yes Human
BAYLOR HISTORICAL 1000 Genomes Pilot 3 Targeted sequencing (non-exome) PRJNA28917   Yes Human
BROAD HISTORICAL 1000 Genomes Deep sequencing of two mother-father-adult child trios   Yes Human
BROAD HISTORICAL 1000 Genomes Sequencing ~2X coverage in ~180 individuals   Yes Human
BROAD HISTORICAL 1000 Genomes Sequencing ~4X coverage in at least 1200 individuals   Yes Human
BROAD HISTORICAL 1000 Genomes Targeted sequencing of ~1000 gene regions in ~1000 individuals   Yes Human
BAYLOR HISTORICAL ARRA Autism Sequencing Collaboration Autism Whole exome PRJNA74861   Yes Human
BROAD HISTORICAL Addressing major unanswered questions in prostate cancer Prostate Cancer phs000330.v1.p1 The Genomic Complexity of Primary Human Prostate Cancer   Yes Human
BROAD HISTORICAL Allelic Spectrum of Common Disease Cardiovascular Disease 76 genes in 4286 individuals Framingham Heart Study Allelic Spectrum Project and JHS Allelic Spectrum Project   Yes Human
BAYLOR HISTORICAL Allelic Spectrum of Common Disease Schizophrenia Targeted sequencing (non-exome)   Yes Human
BROAD HISTORICAL Amish Dystonia & Microcephaly with Chorioretinopathy Dystonia, Microcephaly with Chorioretinopathy 3 affected individuals and 2 unaffected family members for each disease using exome sequencing phs000623.v1.p1 Rare Mendelian Disease in Old Order Amish and Mennonite Patients   Yes Human
BROAD HISTORICAL Autism ARRA Autism Sequencing Collaboration   No Human
BROAD HISTORICAL BI Tumor Sequencing Proposal (TSP) Multiple >5000 T/N pairs by whole exome or genome sequencing   Human
BROAD HISTORICAL Breast and colon cancer in top-tier epidemiologic cohorts and cooperative group trials Breast Cancer, Colon Cancer phs000722.v1.p1 Whole Exome Sequencing of Colorectal Cancer Epidemiologic Cohorts   No Human
BROAD HISTORICAL Chronic Lymphocytic Leukemia (CLL) CLL 91 CLL samples with matched germline controls by exome sequencing   Human
BROAD HISTORICAL Deep extension of exome sequencing in Type 2 Diabetes Type 2 Diabetes (T2D) T2D-GENES Exome Sequencing Study in African Americans, Starr County T2D-GENES Exome Sequencing Study, JHS T2D-GENES Exome Sequencing Study, San Antonio Family Studies Substudy- T2d-GENES Exome Sequencing Study , Metabolic Syndrome in Men (METSIM) Study Substudy - METSIM T2D-GENES Exome Sequencing Study Singapore T2D-GENES Exome Sequencing Study Korean Association Resource (KARE) T2D-GENES Exome Sequencing Study UK South Asian T2D-GENES Exome Sequencing Study Ashkenazi T2D-GENES Exome Sequencing Study   Yes Human
BROAD HISTORICAL Drug -Induced Liver Injury Augmentin induced liver injury (DILI) 75 cases of DILI using exome sequencing   Yes Human
BROAD HISTORICAL Early onset Myocardial Infarction (MI) MIGen_ExS: Atherosclerosis Thrombosis and Vascular Biology; MIGen_ExS: Ottawa Heart; MIGen_ExS: PROCARDIS; MIGen_ExS: Regicor; MIGen_ExS: German Heart Center in Munich; MIGen_ExS: JHS; MIGen_ExS: PROMIS; MIGen_ExS: University Medical Centre Schleswig-Holstein   No Human
BROAD HISTORICAL Esophageal Adenocarcinoma Genome Sequencing Project Esophageal Adenocarcinoma 100 Esophageal Adenocarcinoma T/N pairs by combination of whole exome (85) and whole genome (15) sequencing phs000598.v2.p2 Exome Sequencing of Esophageal Adenocarcinoma   Yes Human
BROAD HISTORICAL Exome Seqeuncing at Gleeson Lab/BI on Ciliopathy Ciliopathy Exome sequencing for 500 ciliopathy patients Ciliopathies Exome Sequencing Initiative   No Human
BROAD HISTORICAL Finnish BMI Extremes Obesity 47 individuals from tails of BMI distributions selected from an eastern Finnish population using exome sequencing   Human
BROAD HISTORICAL GEI Studies Breast cancer   Human
BROAD HISTORICAL GEI Studies Crohn's and colitis NIDDK to initiate dbGAP   Yes Human
HISTORICAL Genomics of familial Hodgkin lymphoma and multiple sclerosis Hodgkin lymphoma, Multiple Sclerosis   Dropped Human
HISTORICAL Germline risk variants in cancer   Dropped Human
BROAD HISTORICAL HDL-C Exome Sequencing Extremly High High- Density Lipoprotein Cholesterol (HDL-C) 48 individuals with extremely high HDL-C and 48 individuals with low HDL-C using exome sequencing Genetics of High HDL Cholesterol   Yes Human
WASHU HISTORICAL Human Structural Variation N/A Sequencing ~0.4X coverage in fosmid ends from up to 21 individuals and BAC ends for a few additional individuals PRJNA29893   No Human
BROAD HISTORICAL Impact of subclonal mutations in indolent B cell malignancies phs000435.v1.p1 Whole Exome Sequencing of Chronic Lymphocytic Leukemia   No Human
BROAD HISTORICAL Lung Adenocarcinoma Tumor Exome Sequencing Project Lung Adenocarcinoma 150 Lung Adenocarcinoma T/N by whole exome sequencing phs000488.v1.p1 Genomic Sequencing of Lung Adenocarcinoma"   Yes Human
BROAD HISTORICAL Medulloblastoma (Pediatric) Sequencing Project Medulloblastoma (Pediatric) 100 Pediatric Medulloblastoma T/N pairs by whole exome sequencing (85) and whole genome sequencing (15) phs000504.v2.p2 Medulloblastoma exome sequence analysis   Yes Human
BROAD HISTORICAL Melanoma Genome Sequencing Project Melanoma 150 Melanoma T/N pairs by combination of whole exome (135) and whole genome (15) sequencing phs000452.v1.p1 Melanoma Genome Sequencing Project   Yes Human
BROAD HISTORICAL Mendelian Disorders Atrial Fibrillation, Dominant (ATFB2) Directed sequencing of all exons in mapped interval   Human
BROAD HISTORICAL Mendelian Disorders Joubert Syndrome (JBTS1; JBTS2; JBTS4; JBTS5) Directed sequencing of all exons in mapped interval   Human
HISTORICAL Mendelian Disorders Lymphedema-Cholestasis Syndrome (LCS) Directed sequencing of all exons in mapped interval   Dropped Human
HISTORICAL Mendelian Disorders Paroxysmal Kinesigenic Dyskinesia (PKD) Directed sequencing of all exons in mapped interval   Dropped Human
BROAD HISTORICAL Neuroblastoma Tumor Exome Sequencing Project (Collaboration with TARGET) Neuroblastoma 100 Neuroblastoma T/N pairs by exome sequencing phs000467.v7.p1 TARGET: Neuroblastoma (NBL)   Yes Human
HISTORICAL Neurodevelopmental disorders   Dropped Human
HISTORICAL Pilot metagenomic sequencing of human intestinal microbiome Metagenomic sequencing   Dropped Human
HISTORICAL Prostate Cancer Prostate Cancer Whole exome   Dropped Human
BROAD HISTORICAL Prostate Cancer Genome Sequencing Project Prostate Cancer 200 Primary "Lethal" Prostate T/N pairs by a combination of whole exome (150) and whole genome (50) sequencing phs000447.v1.p1 Prostate Cancer Genome Sequencing Project   Yes Human
BROAD HISTORICAL Resistance and major response to specific anti-cancer agents phs000452.v1.p1 Melanoma Genome Sequencing Project   No Human
HISTORICAL Schizophrenia   Dropped Human
BROAD HISTORICAL Schizophrenia Exome Sequencing Schizophrenia 5800 samples and 6800 controls from Swedish schizophrenia case-conrolled cohort using exome sequencing pHS000473 Sweden-Schizophrenia Population-Based Case-Control Exome Sequencing   No Human
WASHU HISTORICAL Sequencing and Analysis of Treatment-related AML Genomes t-AML 25 t-AML T/N pairs using whole genome sequencing phs000159   No Human
WASHU HISTORICAL Sequencing of cultivable microbes from human gut and vagina Draft reference genomes of 200 bacteria and archea strains from human Submitted with HMP Bioproject PRJNA43021, PRJNA28331, each genome submitted separately to Nucleotide   Yes Human
HISTORICAL Sequencing of cultivable microbes from human gut and vagina Draft reference genomes of 200 bacteria and archea strains from human   Dropped Human
BAYLOR HISTORICAL Sequencing the Human Microbiome Pilot Metagenomic Sequencing of Human Intestinal Microbiome Human Microbiome Metagenomic WGS PRJNA43017   Yes Human
BAYLOR HISTORICAL Sequencing the Human Microbiome Pilot metagenomic sequencing of human intestinal microbiome Human Microbiome 16S PRJNA48489   Yes Human
BAYLOR HISTORICAL Sequencing the Human Microbiome Sequencing of cultivable microbes from human gut and vagina Human Microbiome Whole genome PRJNA28331   Yes Human
BROAD HISTORICAL T2D Exome Sequencing Type 2 Diabetes (T2D) 1300 individuals with T2D with and 1300 controls using exome sequencing Go Type 2 Diabetes   Yes Human
WASHU HISTORICAL TCGA Breast ductal carcinoma Whole Exome Sequencing PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Breast ductal carcinoma Whole Genome Sequencing PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Colon adenocarcinoma Whole Exome Sequencing PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Colon adenocarcinoma Whole Genome Sequencing PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Glioblastoma multiforme Transcriptome PRJNA74949   Yes Human
BROAD HISTORICAL TCGA Glioblastoma multiforme Transcriptome phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BAYLOR HISTORICAL TCGA Glioblastoma multiforme Transcriptome, RNA, cDNA PRJNA74949   Yes Human
BROAD HISTORICAL TCGA Glioblastoma multiforme Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BAYLOR HISTORICAL TCGA Glioblastoma multiforme Whole exome PRJNA74949   Yes Human
BAYLOR HISTORICAL TCGA Glioblastoma multiforme Whole genome PRJNA74949   Yes Human
BROAD HISTORICAL TCGA Head and Neck squamous cell carcinoma Whole Exome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Head and Neck squamous cell carcinoma Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Lung adenocarcinoma Whole Exome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Lung adenocarcinoma Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Lung squamous cell carcinoma Whole Exome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Lung squamous cell carcinoma Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
WASHU HISTORICAL TCGA Ovarian serous cystadenoma Transcriptome PRJNA74949   Yes Human
BROAD HISTORICAL TCGA Ovarian serous cystadenoma Transcriptome phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BAYLOR HISTORICAL TCGA Ovarian serous cystadenoma Transcriptome, RNA, cDNA PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Ovarian serous cystadenoma Whole Genome Sequencing PRJNA74949   Yes Human
BROAD HISTORICAL TCGA Ovarian serous cystadenoma Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BAYLOR HISTORICAL TCGA Ovarian serous cystadenoma Whole exome PRJNA74949   Yes Human
BAYLOR HISTORICAL TCGA Ovarian serous cystadenoma Whole genome PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Rectal adenocarcinoma Whole Exome Sequencing PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Rectal adenocarcinoma Whole Genome Sequencing PRJNA74949   Yes Human
BROAD HISTORICAL TCGA Renal clear cell carcinoma Whole Exome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Renal clear cell carcinoma Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Renal papillary carcinoma Whole Exome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Renal papillary carcinoma Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Stomach adenocarcinoma Whole Exome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
BROAD HISTORICAL TCGA Stomach adenocarcinoma Whole Genome Sequencing phs000178.v8.p7 The Cancer Genome Atlas (TCGA)   No Human
WASHU HISTORICAL TCGA Uterine corpus (endometrial carcinoma) Whole Exome Sequencing PRJNA74949   Yes Human
WASHU HISTORICAL TCGA Uterine corpus (endometrial carcinoma) Whole Genome Sequencing PRJNA74949   Yes Human
HISTORICAL The Virome in Healthy and Diseased Individuals Transcriptome, RNA, cDNA 251 100% Dropped Human
WASHU HISTORICAL WUGSC TSP Proposal Multiple 100 T/N pairs using whole genome sequencing over 12 months PRJNA176379, PRJNA157235, PRJNA74805, PRJNA41441, phs000159.v4.p2   Yes Human
HISTORICAL X-linked disorders   Dropped Human
BROAD HISTORICAL 200 Mammals Phase 1 Aardvark (Orycteropus afer) Draft assembly PRJNA74587   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Big brown bat (Eptesicus fuscus) Draft assembly PRJNA72449   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 California leaf-nosed bat (Macrotus californicus) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Cape golden mole (Chrysochloris asiatica) Draft assembly PRJNA74591   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Chinchilla (Chinchilla laniger) Draft assembly PRJNA68239   Yes Non-Human
HISTORICAL 200 Mammals Phase 1 Chinese hamster (Cricetulus griseus) Draft assembly   Dropped Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Crested porcupine (Hystrix cristata) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Degu (Octodon degus) Draft assembly PRJNA74595   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Eastern grey kangaroo (Macropus giganteus) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Euarchontoglires (2 primates and 9 non-primates), Laurasiatheria (4 Chiroptea and 6 non-Chiroptea), 4 Afrotheria, 2 Xenarthra, and 3 Marsupial De novo genome sequencing and assembly of 30 mammals in phase 1 Multiple   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Giant anteater (Myrmecophaga tridactyla) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Golden-mantled howling monkey (Alouatta palliata) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Greater horseshoe bat (Rhinolophus ferrumequinum) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Hippopotamus (Hippopotamus amphibius) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Honey Possum (Noolbenger) (Tarsipes rostratus) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Koala (Phascolarctos cinereus) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Lesser Egyptian jerboa (Jaculus jaculus) Draft assembly PRJNA72445   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Long-eared (Rufous) elephant shrew (Elephantulus rufescens) Draft assembly PRJNA74589   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Malayan tapir (Tapirus indicus) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Mexican free-tailed bat (Tadarida brasiliensis) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Naked mole rat (Heterocephalus glaber) Draft assembly PRJNA72441   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 North American porcupine (Erethizon dorsatum) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Ring-tailed lemur (Lemur catta) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Screaming hairy armadillo (Chaetophractus vellerosus) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Springhare (Pedetes capensis) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Star nosed mole (Condylura cristata) Draft assembly PRJNA72447   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Syrian/Golden Hamster (Mesocricetus auratus) Draft assembly PRJNA77669   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Water chevrotain (Hyemoschus aquaticus) Draft assembly   No Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 Weddell seal (Leptonychotes weddellii) Draft assembly PRJNA68235   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 West Indian manatee (Trichechus manatus) Draft assembly PRJNA68243   Yes Non-Human
BROAD HISTORICAL 200 Mammals Phase 1 White rhinocerous (Ceratotherium simum) Draft assembly PRJNA74583   Yes Non-Human
BAYLOR HISTORICAL Bovine Genome Cow (Bos taurus) Draft Assembly PRJNA12555    Yes Non-Human
BROAD HISTORICAL Canine Osteosarcoma and Lymphoma Tumor Resequencing - Pilot Project Dog (Greyhound, Golden Retriever) (Canis familiaris), Osteosarcoma, Lymphoma 6 Osteosarcoma T/N pairs from Greyhounds and 6 Lymphoma T/N pairs from Golden Retrievers by whole genome sequencing PRJNA247491   Yes Non-Human
BROAD HISTORICAL Canine models of cancer PRJNA247491   No Non-Human
AGENCOURT HISTORICAL Cat Felis catus Low Coverage (~2X)   Yes Non-Human
HISTORICAL Coelacanth/Lungfish RNA-Seq Project Slender Lungfish or Spotted African Lungfish (Protopterus dolloi) RNA sequencing of 3 lungfish tissues - brain, testis, mixed organ (RNAseq libraries at 5Gb each) - to complement 1 tissue from coelacanth   Dropped Non-Human
BROAD HISTORICAL Defining the Transcriptome of Nine Vertebrate Genomes Using RNA-Seq Dog, Rabbit, Guinea Pig, Elephant, Armadillo, Bushbaby, Opossum, Anole Lizard, Stickleback RNA sequence from 11 different tissues in 9 different species Multiple   Yes Non-Human
BROAD HISTORICAL Directed Mouse Mutant Re-Sequencing Mouse (Mus musculus) Sequence ~20 mapped and spontaneous mutations and QTL a year and generate mouse exome array set PRJNA71859   Yes Non-Human
WASHU HISTORICAL Discovering biologically relevant Acute Myeloid Leukemia (AML) mutations by sequencing mouse Acute Promyelocytic Leukemia (APL) Genomes Mouse (Mus musculus), AML 14 Mouse APL samples using whole genome sequencing PRJNA247993   No Non-Human
BROAD HISTORICAL Ecdysozoan Sequencing Amphipod Crustacean (Jassa slatteryi) Draft Assembly   No Non-Human
BAYLOR HISTORICAL Ecdysozoan Sequencing Geophilimorph Centipede (Strigamia maritima) Draft Assembly PRJNA20501   Yes Non-Human
WASHU HISTORICAL Ecdysozoan Sequencing Horseshoe Crab (Limulus polyphemus) Draft Assembly PRJNA20489   No Non-Human
BROAD HISTORICAL Ecdysozoan Sequencing Tardigrade (Hypsibius dujardini) Draft Assembly   No Non-Human
BAYLOR HISTORICAL Echinoderm Sequencing Bat Star (Patiria miniata) Draft Assembly PRJNA49323    Yes Non-Human
BAYLOR HISTORICAL Echinoderm Sequencing Sea Urchin (Strongylocentrotus purpuratus) Draft Assembly PRJNA10736   Yes Non-Human
HISTORICAL Evolution of the Human Proteome Hagfish Eptatretus burgeri Draft Assembly   Dropped Non-Human
HISTORICAL Evolution of the Human Proteome Skate Leucoraja erinacea Draft Assembly   Dropped Non-Human
BROAD HISTORICAL Evolution of the Human Proteome African Coelacanth (Latimeria chalumnae) Draft Assembly PRJNA56111   Yes Non-Human
WASHU HISTORICAL Evolution of the Human Proteome Painted Turtle (Chrysemys picta) Draft Assembly PRJNA78657, PRJNA210179   Yes Non-Human
BROAD HISTORICAL Evolution of the Human Proteome Spotted Gar (Lepisosteus oculatus) Draft Assembly PRJNA68247   Yes Non-Human
JCVI HISTORICAL Freshwater Polyp Freshwater Polyp Hydra magnipapillata Draft Assembly   Yes Non-Human
AGENCOURT HISTORICAL Fruit Fly Fruit Fly Drosophila ananassae Draft Assembly   Yes Non-Human
AGENCOURT HISTORICAL Fruit Fly Fruit Fly Drosophila erecta Draft Assembly   Yes Non-Human
AGENCOURT HISTORICAL Fruit Fly Fruit Fly Drosophila grimshawi Draft Assembly   Yes Non-Human
AGENCOURT HISTORICAL Fruit Fly Fruit Fly Drosophila mojavensis Draft Assembly   Yes Non-Human
AGENCOURT HISTORICAL Fruit Fly Fruit Fly Drosophila virilis Draft Assembly   Yes Non-Human
JCVI HISTORICAL Fruit Fly Fruit Fly Drosophila willistoni Draft Assembly   Yes Non-Human
BAYLOR HISTORICAL Fruit Fly Genomes Drosophila Genetic Reference Panel Fruit fly (Drosophila melanogaster) Whole genome PRJNA36679   Yes Non-Human
WASHU HISTORICAL Fruit Fly Genomes Fruit fly (Drosophila mauritiana) Feasibility Sequencing PRJNA20289   Yes Non-Human
BROAD HISTORICAL Fruit Fly Genomes Fruit fly (Drosophila persimilis) Draft Assembly PRJNA12705   Yes Non-Human
BAYLOR HISTORICAL Fruit Fly Genomes Fruit fly (Drosophila pseudoobscura) Draft Assembly PRJNA10626    Yes Non-Human
BROAD HISTORICAL Fruit Fly Genomes Fruit fly (Drosophila sechellia) Draft Assembly PRJNA12711   Yes Non-Human
WASHU HISTORICAL Fruit Fly Genomes Fruit fly (Drosophila simulans) Draft Assembly PRJNA12464, PRJNA29993, PRJNA18237, PRJNA17569, PRJNA17567, PRJNA17565, PRJNA17563, PRJNA17559, PRJNA17557   Yes Non-Human
WASHU HISTORICAL Fruit Fly Genomes Fruit fly (Drosophila yakuba) Draft Assembly PRJNA29999   Yes Non-Human
HISTORICAL Fungal Genome Initiative Fungus (Agaricus bisporus) Draft Assembly   Dropped Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Aspergillus nidulans) Draft Assembly XM_656863   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Batrachochytrium dendrobatidis) Draft Assembly PRJNA13653   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Candida albicans(Strain WO-1)) Draft Assembly PRJNA16373   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Candida guilliermondii) Draft Assembly XM_001481862   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Candida lusitaniae) Draft Assembly PRJNA41079   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Candida tropicalis) Draft Assembly PRJNA13675   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Chaetomium globosum) Draft Assembly PRJNA16821   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Coccidioides immitis) Draft Assembly PRJNA12883   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Coprinus cinereus) Draft Assembly XM_002912152   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Cryptococcus neoformans Serotype A) Draft Assembly PRJNA177334   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Cryptococcus neoformans Serotype B) Draft Assembly PRJNA62089   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Histoplasma capsulatum) Draft Assembly PRJNA20041   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Lodderomyces elongisporus) Draft Assembly PRJNA19611   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Microsporum canis) Draft Assembly PRJNA30939   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Microsporum gypseum) Draft Assembly XM_003177621   Yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Pneumocystis carinii (human and mouse)) Draft Assembly PRJNA223519   Yes Non-Human
HISTORICAL Fungal Genome Initiative Fungus (Podospora anserina) Draft Assembly   Dropped Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Rhizopus oryzae) Draft Assembly PRJNA13066   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Saccharomyces cerevisiae RM11-1a) Draft Assembly PRJNA13674   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Schizosaccharomyces japonicus) Draft Assembly XM_002175797   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Schizosaccharomyces octosporus) Draft Assembly PRJNA13639   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Trichophyton equinum) Draft Assembly PRJNA20577   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Trichophyton rubram) Draft Assembly PRJNA38221   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Trichophyton tonsurans) Draft Assembly PRJNA38223   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Uncinocarpus reesei) Draft Assembly PRJNA39807   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative Fungus (Ustilago maydis) Draft Assembly PRJNA14007   yes Non-Human
BROAD HISTORICAL Fungal Genome Initiative White Nose Fungus (Geomyces destructans) Draft Assembly PRJNA39257   yes Non-Human
WASHU HISTORICAL Fungal Genome Initiative Yeast (Saccharomyces cerevisiae) 10 strains to full draft, 2-fold coverage up to 25 strains coverage PRJNA62061   Yes Non-Human
WASHU HISTORICAL Fungal Genome Initiative Yeast (Saccharomyces kluyveri) Draft Assembly PRJNA1445, PRJNA209023   Yes Non-Human
BROAD HISTORICAL Genome Sequencing of Black Yeasts Black Yeast Draft assemblies and annotations for 14 important species of black yeasts with RNA-seq for 5 of the species PRJNA175043   Yes Non-Human
HISTORICAL Genome and other Sequence Information from Primate Models of HIV Infection  Macaque, Rhesus (Chinese population) (Macaca mulatta) Draft Assembly   Dropped Non-Human
HISTORICAL Genome and other Sequence Information from Primate Models of HIV Infection  Rhesus Macaque (Macaca mulatta) RNA Sequencing   Dropped Non-Human
JCVI HISTORICAL Louse, Body Louse, Body Pediculus humanus Draft Assembly   Yes Non-Human
JCVI HISTORICAL Mosquito Anopheles gambiae, S strain Draft Assembly   Yes Non-Human
BROAD HISTORICAL Mouse Genomes House Mouse (Mus musculus) 5 Mb targeted sequencing per line, eventually several hundred lines   Yes Non-Human
BROAD HISTORICAL Mouse Genomes House Mouse (Mus musculus) Exome and targeted resequencing of mouse mutants PRJNA247497   Yes Non-Human
BROAD HISTORICAL Mouse Genomes House Mouse (Mus musculus) Finished sequence PRJNA13183   Yes Non-Human
BAYLOR HISTORICAL Mouse Genomes House Mouse (Mus musculus) Finished sequence PRJNA13183   Yes Non-Human
WASHU HISTORICAL Mouse Genomes House Mouse (Mus musculus) Finished sequence   No Non-Human
BAYLOR HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Increased Coverage of 2X Mammals Nine-banded Armadillo (Dasypus novemcinctus) Draft Assembly PRJNA12594    Yes Non-Human
BAYLOR HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Top-up of Remaining 2X Mammals Dolphin (Tursiops truncatus) Draft Assembly PRJNA20367   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation African Savannah Elephant (Loxodonta africana africana) Draft Assembly PRJNA12569   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation African Savannah Elephant (Loxodonta africana africana) Low coverage (2X) PRJNA12569   Yes Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation African Savannah Elephant (Loxodonta africana africana) Transcriptome   Dropped Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Alpaca (Vicugna pacos) Draft Assembly PRJNA30567   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Alpaca (Vicugna pacos) Low coverage (2X) PRJNA30567   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Bushbaby (Galago) (Otolemur garnetti) Low coverage (2X) PRJNA16955   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Cat (Felis catus) Low coverage (2X) PRJNA16726, PRJNA175699   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Common European Shrew (Sorex araneus) Draft Assembly PRJNA13689   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Common European Shrew (Sorex araneus) Low coverage (2X) PRJNA13689   Yes Non-Human
BAYLOR HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Dolphin (Tursiops truncatus) Low coverage (2X) PRJNA20367   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Domestic Cat (Felis catus) Draft Assembly PRJNA16726, PRJNA175699   Yes Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Elephant Shrew (Elephantulus sp.  ) Low coverage (2X)   Dropped Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation European Hedgehog (Erinaceus europaeus) Draft Assembly PRJNA74585   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation European Hedgehog (Erinaceus europaeus) Low coverage (2X) PRJNA74585   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Flying Lemur (Dermoptera sp.) Draft Assembly PRJNA20511   No Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Flying Lemur (Dermoptera sp.) Low coverage (2X)   Dropped Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Guinea Pig (Cavia porcellus) Draft Assembly PRJNA12583   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Guinea Pig (Cavia porcellus) Low coverage (2X) PRJNA12583   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Guinea Pig (Cavia porcellus) Transcriptome   No Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Horse (Equus caballas) Draft Assembly PRJNA18661   Yes Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Horse (Equus caballas) Low coverage (2X)   Dropped Non-Human
BAYLOR HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Hyrax (Procavia capensis) Low coverage (2X) PRJNA13972   Yes Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Kangaroo Rat (Dipodomys sp.) Draft Assembly   Dropped Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Large Flying Fox (Megabat) (Pteropus vampyrus) Draft Assembly   Dropped Non-Human
BAYLOR HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Large Flying Fox (Megabat) (Pteropus vampyrus) Low coverage (2X) PRJNA20325    Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Little Brown Bat (Microbat) (Myotis lucifugus) Draft Assembly PRJNA16951   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Little Brown Bat (Microbat) (Myotis lucifugus) Low coverage (2X) PRJNA16951   Yes Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Llama (Llama sp.) Low coverage (2X)   Dropped Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Mole (Cryptomys sp.) Low coverage (2X)   Dropped Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Mouse Lemur (Microcebus murinus) Low coverage (2X) PRJNA19967   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Nine-banded Armadillo (Dasypus novemcinctus) Low coverage (2X) PRJNA12594   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Nine-banded Armadillo (Dasypus novemcinctus) Transcriptome PRJNA163137   Yes Non-Human
BAYLOR HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Ord's kangaroo rat (Dipodomys ordii) Low coverage (2X) PRJNA20385   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Pangolin (Manis pentadactyla) Draft Assembly PRJNA20331   No Non-Human
HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Pangolin (Manis pentadactyla) Low coverage (2X)   Dropped Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Pika (Ochotona princeps) Draft Assembly PRJNA74593   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Pika (Ochotona princeps) Low coverage (2X) PRJNA19235   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Rabbit (Oryctolagus cuniculus) Draft Assembly PRJNA12819   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Rabbit (Oryctolagus cuniculus) Low coverage (2X) PRJNA12819   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Rabbit (Oryctolagus cuniculus) Transcriptome PRJNA78323   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Sloth (Choloepus hoffmanni) Draft Assembly PRJNA30809   No Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Sloth (Choloepus hoffmanni) Low coverage (2X) PRJNA30809   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Squirrel (Spermophilis tridecemlineatus) Draft Assembly PRJNA61725   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Squirrel (Spermophilis tridecemlineatus) Low coverage (2X) PRJNA13937   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Tarsier (Tarsier syrichta) Low coverage (2X) PRJNA20339   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Tenrec (Hedgehog) (Echinops telfairi) Draft Assembly PRJNA12590   Yes Non-Human
BROAD HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Tenrec (Lesser Hedgehog) (Echinops telfairi) Low coverage (2X) PRJNA12590   Yes Non-Human
BGI HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Tree Shrew (Tupaia belangeri) Draft Assembly PRJNA20273   No Non-Human
WASHU HISTORICAL Multiple Mammalian Genomes for Comparative Genome Annotation Tree Shrew (Tupaia belangeri) Low coverage (2X) PRJNA13971   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Y Chromosomes Cow (Bos taurus) Genome Refinement PRJNA20275   Yes Non-Human
BAYLOR HISTORICAL Multiple Mammalian Y Chromosomes Cow (Bos taurus) Genome Refinement PRJNA20275   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Y Chromosomes Laboratory Opposum (Monodelphis domestica) Genome Refinement PRJNA74623   Yes Non-Human
WASHU HISTORICAL Multiple Mammalian Y Chromosomes Marmoset (Callithrix jacchus) Genome Refinement PRJNA20401, PRJNA46205   Yes Non-Human
BAYLOR HISTORICAL Multiple Mammalian Y Chromosomes Rat (Rattus norvegicus) Genome Refinement PRJNA222509   No Non-Human
WASHU HISTORICAL Multiple Mammalian Y Chromosomes Rat (Rattus norvegicus) Genome Refinement PRJNA10629   Yes Non-Human
BAYLOR HISTORICAL Multiple Mammalian Y Chromosomes Rhesus Macaque (Macaca mulatta) Genome Refinement PRJNA253406   No Non-Human
WASHU HISTORICAL Multiple Mammalian Y Chromosomes Rhesus Macaque (Macaca mulatta) Genome Refinement PRJNA16397, PRJNA12537   Yes Non-Human
WASHU HISTORICAL Nematode Sequencing Entomopathogenic Nematode (Heterorhabditis bacteriophora) Draft Assembly PRJNA13977   Yes Non-Human
WASHU HISTORICAL Nematode Sequencing Hookworm (Ancylostoma caninum) Draft Assembly PRJNA72585, PRJNA20441   No Non-Human
WASHU HISTORICAL Nematode Sequencing Hookworm (Necator americanus) Draft Assembly PRJNA72135, PRJNA20443   No Non-Human
WASHU HISTORICAL Nematode Sequencing Nematode (Pristionchus pacificus) Draft Assembly PRJNA12644   Yes Non-Human
WASHU HISTORICAL Nematode Sequencing Strongylid nematode (Ancylostoma duodenale replaces Nippostrongylus brasiliensis) Draft Assembly PRJNA72581, PRJNA12858   No Non-Human
WASHU HISTORICAL Nematode Sequencing Strongylid nematode (Teladorsagia circumcincta) Draft Assembly PRJNA72569   No Non-Human
WASHU HISTORICAL Nematode Sequencing Strongylid nematode (Trichostrongylus colubriformis replaces Trichostrongylus vitrinus) Draft Assembly PRJNA74537   No Non-Human
BROAD HISTORICAL Origins of Multicellularity Amastigomonas sp. Draft Assembly PRJNA20469   Yes Non-Human
BROAD HISTORICAL Origins of Multicellularity Fungus (Spizellomyces punctatus) Low coverage (2X)   No Non-Human
BROAD HISTORICAL Origins of Multicellularity Protist (Amoebidium parasiticum) Low coverage (2X) PRJNA189476   100% Yes Non-Human
BROAD HISTORICAL Origins of Multicellularity Protist (Capsaspora owczarzaki) Draft Assembly PRJNA20341   100% Yes Non-Human
BROAD HISTORICAL Origins of Multicellularity Protist (Ministeria vibrans) Draft Assembly PRJNA39421   100% No Non-Human
HISTORICAL Origins of Multicellularity Protist (Nuclearia simplex) Draft Assembly PRJNA20493   100% Dropped Non-Human
BROAD HISTORICAL Origins of Multicellularity Protist (Salpingoeca rosetta) Draft Assembly PRJNA37927   100% Yes Non-Human
BROAD HISTORICAL Origins of Multicellularity Protist (Schaeroforma arctica) Low coverage (2X) PRJNA20463   100% Yes Non-Human
HISTORICAL Origins of Multicellularity Protist (Stephanoeca or Acanthocoepis sp.) Low coverage (2X)   Dropped Non-Human
BROAD HISTORICAL Origins of Multicellularity Protist (Thecamonas trahens) Draft Assembly PRJNA20469   100% Yes Non-Human
BROAD HISTORICAL Origins of Multicellularity Yeast (Allomyces macrogynus) Draft Assembly PRJNA20563   100% Yes Non-Human
BROAD HISTORICAL Origins of Multicellularity Yeast (Mortierella verticulata) Low coverage (2X) PRJNA20603   100% Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Anole Lizard (Anolis carolinensis) Draft Assembly PRJNA18787   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Anole Lizard (Anolis carolinensis) Transcriptome PRJNA78917   Yes Non-Human
WASHU HISTORICAL Other Model Chordate & Vertebrate Genomes Chicken (Gallus gallus) Draft Assembly PRJNA10808   Yes Non-Human
WASHU HISTORICAL Other Model Chordate & Vertebrate Genomes Chicken (Gallus gallus) Genome Refinement PRJNA13342   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Dog (Canis familiaris) Draft Assembly PRJNA13179   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Dog (Canis familiaris) Genome Refinement PRJNA13179   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Dog (Canis familiaris) Transcriptome PRJNA78827   Yes Non-Human
WASHU HISTORICAL Other Model Chordate & Vertebrate Genomes Elephant Shark (Callorhynchus milii) Draft Assembly PRJNA18361   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Ferret (Mustela putorius furo) Draft Assembly PRJNA78317   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Gray Short-Tailed Opposum (Monodelphis domestica) Draft Assembly PRJNA12561   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Gray Short-Tailed Opposum (Monodelphis domestica) Transcriptome PRJNA164819   Yes Non-Human
WASHU HISTORICAL Other Model Chordate & Vertebrate Genomes Platypus (Ornithorhynchus anatinus) Draft Assembly PRJNA12885, PRJNA19039   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Prarie Vole (Microtus ochrogaster) Draft assembly, SNP resource, and low-coverage of related species PRJNA72443   Yes Non-Human
WASHU HISTORICAL Other Model Chordate & Vertebrate Genomes Sea Lamprey (Petromyzon marinus) Draft Assembly PRJNA12880   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Threespine Stickleback (Gasterosteus aculeatus) Draft Assembly PRJNA13579   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Threespine Stickleback (Gasterosteus aculeatus) Transcriptome PRJNA163141   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Tilapia Cichlid (Astatotilapia burtoni) Draft Assembly PRJNA60363   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Tilapia Cichlid (Metriaclima zebra) Draft Assembly PRJNA60369   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Tilapia Cichlid (Oreochromis niloticus) Draft Assembly PRJNA59571   Yes Non-Human
BROAD HISTORICAL Other Model Chordate & Vertebrate Genomes Tilapia Cichlid (Paralibidichromis chilotes) Draft Assembly PRJNA60367   Yes Non-Human
WASHU HISTORICAL Other Model Chordate & Vertebrate Genomes Zebra finch (Taeniopygia guttata) Draft Assembly PRJNA17289, PRJNA32405   Yes Non-Human
WASHU HISTORICAL Other Model Chordate & Vertebrate Genomes Zebra finch (Taeniopygia guttata) Physical Map   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Acorn Worm (Saccoglossus kowalesvskii) Draft Assembly PRJNA12887   Yes Non-Human
HISTORICAL Other Model Invertebrate Genomes Choanoflagellate (Monosiga ovata) Draft Assembly PRJNA12871   Dropped Non-Human
WASHU HISTORICAL Other Model Invertebrate Genomes Freshwater Snail (Biomphalaria glabrata) Draft Assembly PRJNA12879   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Honey Bee (Apis mellifera) Draft Assembly PRJNA10625   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Honey Bee (Apis mellifera) Genome Refinement  PRJNA10625   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Parasitoid Wasp (Nasonia giraulti) Draft Assembly PRJNA20223   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Parasitoid Wasp (Nasonia longicornis) Draft Assembly PRJNA20225   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Parasitoid Wasp (Nasonia vitripennis) Draft Assembly PRJNA13660   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Pea Aphid (Acyrtohosiphon pisum) Draft Assembly PRJNA13657   Yes Non-Human
HISTORICAL Other Model Invertebrate Genomes Placazoan (Trichoplax adhaerens) Draft Assembly   Dropped, done elsewhere Non-Human
WASHU HISTORICAL Other Model Invertebrate Genomes Planarian (Schmidtea mediterranea) Draft Assembly PRJNA12585   Yes Non-Human
BROAD HISTORICAL Other Model Invertebrate Genomes Pufferfish (Tetraodon nigroviridis) Draft Assembly PRJNA20435   Yes Non-Human
BAYLOR HISTORICAL Other Model Invertebrate Genomes Red Flour Beetle (Tribolium castaneum) Draft Assembly PRJNA12540   Yes Non-Human
BROAD HISTORICAL Other Model Invertebrate Genomes Sea Squirt (Ciona savignyi) Draft Assembly PRJNA1435   Yes Non-Human
BROAD HISTORICAL Other Model Invertebrate Genomes Sea slug (Aplysia californica) Draft Assembly PRJNA13635   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Capronia coronata / Exophiala) Draft Assembly PRJNA164585   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Capronia epimyces) Draft Assembly PRJNA164587   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Cladophialophora bantiana) Draft Assembly PRJNA233316   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Cladophialophora carrionii) Draft Assembly PRJNA185784   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Cladophialophora psammophila) Draft Assembly  PRJNA164589   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Cladophialophora yegresii) Draft Assembly PRJNA164591   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Coniosporium apollinis) Draft Assembly   No Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Coniosporium epidermidis) Draft Assembly   No Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Exophiala aquamarina) Draft Assembly PRJNA164593   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Exophiala dermatitidis) Draft Assembly   No Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Exophiala spinifera) Draft Assembly   No Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Fonsecaea pedrosoi) Draft Assembly PRJNA233314   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Ochroconis gallopava) Draft Assembly   No Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Phialophora europaea) Draft Assembly   No Non-Human
BROAD HISTORICAL Pathogens and Vectors Black Yeast (Rhinocladiella mackenziei) Draft Assembly PRJNA233315   Yes Non-Human
WASHU HISTORICAL Pathogens and Vectors Mosquito (Anopheles gambiae (M strain)) Draft Assembly PRJNA20295   Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Mosquito (Anopheles species) High quality assembly for 13 species; 200,000 EST of each species PRJNA67129   100% Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Protist (Plasmodium vivax) 8x coverage of 6 species/strains; 40k ESTs PRJNA67239/PRJNA67237/PRJNA67065/PRJNA65119   100% Yes Non-Human
BROAD HISTORICAL Pathogens and Vectors Protist (Plasmodiums and other related species) Draft sequence and ESTs of multiple isolates of P. falciparum, P. vivax, and related species for comparative and model system studies PRJNA72437   100% Yes Non-Human
BAYLOR HISTORICAL Pathogens and Vectors Sandfly (Lutzomyia longipalpis) BAC library construction; BAC-end sequencing PRJNA20279   Yes Non-Human
HISTORICAL Pathogens and Vectors Sandfly (Lutzomyia longipalpis) BAC library construction; BAC-end sequencing   Dropped Non-Human
WASHU HISTORICAL Pathogens and Vectors Sandfly (Phlebotomus papatasi) BAC library construction; BAC-end sequencing PRJNA20293   Yes Non-Human
WASHU HISTORICAL Pathogens and Vectors Triatomid Bug (Rhodnius prolixus) Draft Assembly PRJNA13648   Yes Non-Human
WASHU HISTORICAL Pathogens and Vectors Trichinella (Trichinella spiralis) Draft Assembly PRJNA12647, PRJNA12603, PRJNA66457   Yes Non-Human
WASHU HISTORICAL Pathogens and Vectors Trichinella (Trichinella spiralis) Genome Refinement PRJNA12647, PRJNA12603, PRJNA66457   Yes Non-Human
HISTORICAL Pathogens and Vectors Tsetse Fly (Glossina species) Draft genome assembly and transcriptome sequencing of five Glossina genomes and two comparative genomes; low coverage genome sequencing of ~12  field populations.   Dropped Non-Human
BAYLOR HISTORICAL Peromyscus Deer Mouse (Peromyscus californicus) Low coverage (2X) PRJNA53595   Yes Non-Human
BAYLOR HISTORICAL Peromyscus Deer Mouse (Peromyscus maniculatus) Draft Assembly PRJNA53563   Yes Non-Human
BAYLOR HISTORICAL Peromyscus Deer Mouse (Peromyscus polionotus) Low coverage (2X) PRJNA53593   Yes Non-Human
BAYLOR HISTORICAL Peromyscus White-footed mouse (Peromyscus leucopus) Low coverage (2X) PRJNA53591    Yes Non-Human
BROAD HISTORICAL Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans Cyptococcus (multiple variety) (Cyptococcus gatti) Draft assembly  PRJNA174567   Yes Non-Human
BROAD HISTORICAL Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans Cyptococcus (multiple variety) (Cyptococcus neoformans (various species) De novo genome assembly of 113 C. neoformans var. grubii, 15 var. neoformans, 14 hybrids, 15 C. gatti, and 18 other Tremellales species; resequencing of 159 for var. grubii  PRJNA174567   Yes Non-Human
BROAD HISTORICAL Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans Cyptococcus (multiple variety) (Cyptococcus neoformans var. grubii) Draft assembly  PRJNA174567   Yes Non-Human
BROAD HISTORICAL Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans Cyptococcus (multiple variety) (Cyptococcus neoformans var. grubii) Resequencing  PRJNA174567   Yes Non-Human
BROAD HISTORICAL Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans Cyptococcus (multiple variety) (Cyptococcus neoformans var. neoformans) Draft assembly  PRJNA174567   Yes Non-Human
BROAD HISTORICAL Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans Cyptococcus (multiple variety) (Hybrids) Draft assembly  PRJNA174567   Yes Non-Human
BROAD HISTORICAL Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans Cyptococcus (multiple variety) (Other Tremellales species) Draft assembly  PRJNA174567   Yes Non-Human
HISTORICAL Primate Genomes Bonobo (Pan paniscus) Fosmid-end sequencing   Dropped Non-Human
BROAD HISTORICAL Primate Genomes Bushbaby (Otolemur garnetti) Draft Assembly PRJNA16955   Yes Non-Human
BROAD HISTORICAL Primate Genomes Bushbaby/Galago (Otolemur garnetti) Transcriptome PRJNA163171   Yes Non-Human
BROAD HISTORICAL Primate Genomes Chimpanzee (Pan troglodytes) Draft Assembly PRJNA13184   Yes Non-Human
WASHU HISTORICAL Primate Genomes Chimpanzee (Pan troglodytes) Draft Assembly PRJNA10627   Yes Non-Human
WASHU HISTORICAL Primate Genomes Chimpanzee (Pan troglodytes) Genome Refinement PRJNA13184   Yes Non-Human
WASHU HISTORICAL Primate Genomes Cynomolgus Macaque (Macaca fascicularis) Draft Assembly PRJNA20409   Yes Non-Human
WASHU HISTORICAL Primate Genomes Gibbon (Nomascus leucogenys) BAC-end sequencing PRJNA13975, PRJNA62133   Yes Non-Human
BAYLOR HISTORICAL Primate Genomes Gibbon (Nomascus leucogenys) Draft Assembly PRJNA13975    Yes Non-Human
WASHU HISTORICAL Primate Genomes Gibbon (Nomascus leucogenys) Targeted BAC finishing   Yes Non-Human
WASHU HISTORICAL Primate Genomes Marmoset (Callithrix jacchus) Draft Assembly PRJNA20401, PRJNA46205   Yes Non-Human
BAYLOR HISTORICAL Primate Genomes Marmoset (Callithrix jacchus) Draft Assembly PRJNA20401   Yes Non-Human
WASHU HISTORICAL Primate Genomes Marmoset (Callithrix jacchus) Targeted BAC finishing   Yes Non-Human
BAYLOR HISTORICAL Primate Genomes Marmoset (Callithrix jacchus) Targeted BAC finishing PRJNA20401   Yes Non-Human
BAYLOR HISTORICAL Primate Genomes Olive Baboon (Papio anubis) Draft Assembly PRJNA54005    Yes Non-Human
BAYLOR HISTORICAL Primate Genomes Orangutan (Pongo abelii) Draft Assembly PRJNA20869   Yes Non-Human
HISTORICAL Primate Genomes Orangutan (Pongo abelii) Targeted BAC finishing   Dropped Non-Human
WASHU HISTORICAL Primate Genomes Orangutan (Pongo pygmaeus) Draft Assembly PRJNA74653   Yes Non-Human
WASHU HISTORICAL Primate Genomes Orangutan (Pongo pygmaeus) Targeted BAC finishing   Yes Non-Human
BAYLOR HISTORICAL Primate Genomes Rhesus Macaque (Macaca mulatta) Draft Assembly PRJNA12537    Yes Non-Human
WASHU HISTORICAL Primate Genomes Rhesus Macaque (Macaca mulatta) Draft Assembly PRJNA16397, PRJNA12537   Yes Non-Human
WASHU HISTORICAL Primate Genomes Rhesus Macaque (Macaca mulatta) Targeted BAC finishing   Yes Non-Human
BAYLOR HISTORICAL Primate Genomes Rhesus Macaque (Macaca mulatta) Targeted BAC finishing PRJNA12537    Yes Non-Human
BROAD HISTORICAL Primate Genomes Squirrel Monkey (Saimiri sp.) Draft Assembly PRJNA67945   Yes Non-Human
WASHU HISTORICAL Primate Genomes Tarsier (Tarsier syrichta) Draft Assembly PRJNA20339   Yes Non-Human
BAYLOR HISTORICAL Protist Systems Amoeba (Acanthamoeba castellanii) Draft Assembly PRJNA20303   Yes Non-Human
WASHU HISTORICAL Protist Systems Slime mold (Physarum polycephalum) Draft Assembly PRJNA12851   Yes Non-Human
WASHU HISTORICAL Protist Systems Spirotrich ciliate (Oxytricha trifallax [macronucleus]) Draft Assembly PRJNA74629   Yes Non-Human
WASHU HISTORICAL Protist Systems Spirotrich ciliate (Oxytricha trifallax [micronucleus + equivalent macronucleus sequences]) Draft Assembly PRJNA74629   Yes Non-Human
BROAD HISTORICAL Protist Systems Tetrahymena (Tetrahymena thermophila ) Draft Assembly PRJNA177802   100% Yes Non-Human
BAYLOR HISTORICAL Rat Genome Rat (Rattus norvegicus) Draft Assembly PRJNA10629    Yes Non-Human
BAYLOR HISTORICAL Rat Genome Rat (Rattus norvegicus) Genome Refinement PRJNA10629    No Non-Human
HISTORICAL Rat Genome Rat (Rattus norvegicus) SNP Discovery   Dropped Non-Human
WASHU HISTORICAL Roundworm Genomes Roundworm (Caenorhabditis brenneri) Draft Assembly PRJNA20035   Yes Non-Human
WASHU HISTORICAL Roundworm Genomes Roundworm (Caenorhabditis brenneri) Genome Refinement PRJNA20035   Yes Non-Human
WASHU HISTORICAL Roundworm Genomes Roundworm (Caenorhabditis briggsae) Draft Assembly PRJNA20855   Yes Non-Human
WASHU HISTORICAL Roundworm Genomes Roundworm (Caenorhabditis elegans) Finishing   Yes Non-Human
WASHU HISTORICAL Roundworm Genomes Roundworm (Caenorhabditis japonica) Draft Assembly PRJNA12591   Yes Non-Human
WASHU HISTORICAL Roundworm Genomes Roundworm (Caenorhabditis remanei) Draft Assembly PRJNA12588, PRJNA53967   Yes Non-Human
WASHU HISTORICAL Roundworm Genomes Roundworm (Caenorhabditis remanei) Genome Refinement PRJNA12588, PRJNA53967   Yes Non-Human
BAYLOR HISTORICAL Tammar Wallaby Genome Tammar Wallaby (Macropus eugenii) Draft Assembly PRJNA12587   Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila biarmipes) Draft Assembly PRJNA62307   Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila bipectinata) Draft Assembly PRJNA62313    Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila elegans) Draft Assembly PRJNA62315    Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila eugracilis) Draft Assembly PRJNA67709    Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila ficusphila) Draft Assembly PRJNA62317   Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila kikkawai) Draft Assembly PRJNA62319   Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila melanogaster, OregonR) Draft Assembly PRJNA252961   Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila rhopaloa) Draft Assembly PRJNA67665   Yes Non-Human
BAYLOR HISTORICAL modENCODE Comparative Genomics Fruit fly (Drosophila takahashii) Draft Assembly PRJNA62321   Yes Non-Human
WASHU HISTORICAL modENCODE Comparative Genomics Roundworm (Caenorhabditis sp. 11 (JU1373)) Draft Assembly PRJNA63453, PRJNA53597   Yes Non-Human
HISTORICAL modENCODE Comparative Genomics Roundworm (Caenorhabditis sp. 7 (JU1199)) Draft Assembly   Dropped Non-Human
HISTORICAL modENCODE Comparative Genomics Roundworm (Caenorhabditis sp. 9 (JU1325)) Draft Assembly   Dropped Non-Human

Top of page

Last Updated: July 10, 2014