Last updated: June 06, 2014
Approved Sequencing Targets
Please note: To review a list and database of the previous approved sequencing targets, see: www.genome.gov/10002154/approved-sequencing-targets-archive.
Status Approved Sequencing Targets
Center | Active / Historical | Proposal or Project Name | Sub-Project Name | Common Name (Species Name), Tumor Type, Phenotype, or Disease | Data Type | Name registered in dbGap/ BioProject | Capacity needed for project (Gb) | % sequencing complete | Project Finished? | Human / Non-Human |
---|---|---|---|---|---|---|---|---|---|---|
WASHU | ACTIVE | 1000 Genomes | Full Scale | Â | Whole exome | PRJNA28889 | 7850 | 100% | Yes | Human |
BAYLOR | ACTIVE | 1000 Genomes | Full Scale | Â | Whole exome | PRJNA59773 | 3193 | 100% | Yes | Human |
WASHU | ACTIVE | 1000 Genomes | Full Scale | Â | Whole genome | PRJNA28889 | 5650 | 100% | Yes | Human |
BAYLOR | ACTIVE | 1000 Genomes | Full Scale | Â | Whole genome | PRJNA59771 | 4050 | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Phase 2 | Â | Whole exome | Â | Â | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Phase 2 | Â | Whole genome | Â | Â | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Phase 3 | Â | Whole exome | Â | Â | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Phase 3 | Â | Whole genome | Â | Â | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Phase 3 Validation | Â | Whole exome | Â | Â | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Phase 3 Validation | Â | Whole genome | Â | Â | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Pilot + Phase 1 | Â | Whole exome | Â | Â | 100% | Yes | Human |
BROAD | ACTIVE | 1000 Genomes | Pilot + Phase 1 | Â | Whole genome | Â | Â | 100% | Yes | Human |
BAYLOR | ACTIVE | Age-related Brain MRI & Cognitive Change | Â | Â | Whole exome | PRJNA252586 | 24000 | 93% | No | Human |
WASHU | ACTIVE | Aggressive Prostate Carcinoma | Â | Prostate Cancer | Targeted sequencing (non-exome) | dbGaP study phs000661 | 800 | 51% | No | Human |
WASHU | ACTIVE | Aggressive Prostate Carcinoma | Â | Prostate Cancer | Transcriptome, RNA, cDNA | dbGaP study phs000661 | 1250 | 59% | No | Human |
WASHU | ACTIVE | Aggressive Prostate Carcinoma | Â | Prostate Cancer | Whole exome | dbGaP study phs000661 | 10000 | 96% | No | Human |
WASHU | ACTIVE | Aggressive Prostate Carcinoma | Â | Prostate Cancer | Whole genome | dbGaP study phs000661 | 12750 | 96% | No | Human |
WASHU | ACTIVE | Allelic Spectrum of Common Disease | Â | Age-related macular degeneration | Targeted sequencing (non-exome) | dbGaP study phs000685 | 11000 | 94% | No | Human |
WASHU | ACTIVE | Allelic Spectrum of Common Disease | Â | Diabetes | Targeted sequencing (non-exome) | PRJNA75933 and dbGaP phs000276 | 10000 | 99% | No | Human |
WASHU | ACTIVE | Allelic Spectrum of Common Disease | Â | Diabetes | Whole exome | PRJNA75933 and dbGaP phs000100/phs00 | 1000 | 90% | No | Human |
WASHU | ACTIVE | Allelic Spectrum of Common Disease | Â | Metabolic syndrome | Targeted sequencing (non-exome) | PRJNA75933 and dbGaP phs000276 | 19000 | 96% | No | Human |
WASHU | ACTIVE | Allelic Spectrum of Common Disease | Â | Metabolic syndrome | Whole exome | PRJNA75933 and dbGaP phs000276 | 2000 | 87% | No | Human |
BROAD | ACTIVE | Allelic Spectrum of Common Disease | Â | Schizophrenia | Whole exome | pHS000473 | Â | 100% | No | Human |
BROAD | ACTIVE | Allelic Spectrum of Common Disease | Â | Schizophrenia | Whole exome | Â | 24129 | 51% | No | Human |
BROAD | ACTIVE | Allelic Spectrum of Common Disease | Â | Schizophrenia | Whole genome | Â | Â | 6% | No | Human |
BROAD | ACTIVE | Alzheimer's Disease Sequencing Project | Family studies | Alzheimer's Disease | Whole exome | phs000572 Alzheimer's Disease Sequencing Project (ADSP) | 32382 | 99% | No | Human |
BROAD | ACTIVE | Alzheimer's Disease Sequencing Project | Family studies | Alzheimer's Disease | Whole genome | phs000572 Alzheimer's Disease Sequencing Project (ADSP) | 21945 | 100% | No | Human |
BAYLOR | ACTIVE | Alzheimer's Disease Sequencing Project | Full Scale | Alzheimer's Disease | Whole exome | PRJNA205518 | 17500 | 99% | No | Human |
BAYLOR | ACTIVE | Alzheimer's Disease Sequencing Project | Full Scale | Alzheimer's Disease | Whole genome | PRJNA205518 | 19554 | 100% | No | Human |
WASHU | ACTIVE | Alzheimer's Disease Sequencing Project | Â | Alzheimer's Disease | Whole exome | PRJNA155369; dbGaP phs000572 | 39375 | 53% | No | Human |
WASHU | ACTIVE | Alzheimer's Disease Sequencing Project | Â | Alzheimer's Disease | Whole genome | PRJNA155369; dbGaP phs000572 | 22230 | 99% | No | Human |
BAYLOR | ACTIVE | Breast Cancer | Â | Breast Cancer | Transcriptome, RNA, cDNA | phs000770.v1.p1 | 27 | 100% | No | Human |
BAYLOR | ACTIVE | Breast Cancer | Â | Breast Cancer | Whole exome | phs000770.v1.p1 | 885 | 100% | No | Human |
BAYLOR | ACTIVE | Breast Cancer | Â | Breast Cancer | Whole genome | phs000770.v1.p1 | 27 | 100% | No | Human |
WASHU | ACTIVE | Breast Cancer Post-Treatment | Â | Breast Cancer | Targeted sequencing (non-exome) | PRJNA89531, phs000472 | 1000 | 94% | No | Human |
WASHU | ACTIVE | Breast Cancer Post-Treatment | Â | Breast Cancer | Whole genome | PRJNA89531, phs000472 | 5500 | 96% | No | Human |
WASHU | ACTIVE | Breast Cancer Susceptibility | Â | Breast Cancer | Targeted sequencing (non-exome) | PRJNA248436 | 2000 | 0% | No | Human |
WASHU | ACTIVE | Breast Cancer Susceptibility | Â | Breast Cancer | Whole exome | PRJNA248436 | 5200 | 100% | No | Human |
WASHU | ACTIVE | Breast Cancers and their Xenotransplants | Â | Breast Cancer | Targeted sequencing (non-exome) | dbGaP study phs000611 | 150 | 98% | No | Human |
WASHU | ACTIVE | Breast Cancers and their Xenotransplants | Â | Breast Cancer | Whole genome | dbGaP study phs000611 | 7310 | 100% | No | Human |
BROAD | ACTIVE | CLL Genomics | Â | Chronic Lymphocytic Leukemia | Whole exome | phs000435.v1.p1 | 12114 | 49% | No | Human |
WASHU | ACTIVE | Cleft Lip | Â | Cleft Lip and palate | Whole exome | phs000625 | Â | Â | No | Human |
BROAD | ACTIVE | Diabetes Multiethnic Cohort | Â | Diabetes | Whole exome | Multiple | Â | Â | Yes | Human |
BROAD | ACTIVE | Early Onset Myocardial Infarction | Â | Early Onset Myocardial Infarction | Whole exome | Â | Â | 69% | No | Human |
WASHU | ACTIVE | Finn-Seq FINRISK Cohort | Â | Cardiometabolic Syndrome | Whole exome | PRJNA247963 | 32000 | Â | No | Human |
WASHU | ACTIVE | Finn-Seq METSIM Cohort | Â | Cardiometabolic Syndrome | Whole exome | PRJNA248458 | 32000 | Â | No | Human |
BROAD | ACTIVE | Finnish Alzheimer's Disease Exome Sequencing | Â | Alzheimer's Disease | Whole exome | Will be deposited in EGA | Â | Â | No | Human |
WASHU | ACTIVE | GEI GWASeq | Â | Cleft Lip | Targeted sequencing (non-exome) | dbGap phs000625 | 6000 | 93% | No | Human |
BAYLOR | ACTIVE | GEI Studies | Â | Colon Cancer | Targeted sequencing (non-exome) | Â | 5353 | 100% | No | Human |
BAYLOR | ACTIVE | GEI Studies | Â | Psoriasis | Targeted sequencing (non-exome) | PRJNA253636 | 6269 | 100% | No | Human |
BAYLOR | ACTIVE | Genetic Architecture of Common Chronic Disease | Â | Â | Whole exome | PRJNA252586 | 30000 | 84% | No | Human |
BAYLOR | ACTIVE | Genetic Architecture of Common Chronic Disease | Â | Â | Whole genome | PRJNA252586 | 19000 | 45% | No | Human |
WASHU | ACTIVE | Genome Reference Constortium | Â | Â | BACs, clones, linked-pair libraries | PRJNA29893 | 150 | 4% | No | Human |
BAYLOR | ACTIVE | Genomic Analysis of Newborns | Â | Â | Whole exome | Â | 7200 | 2% | No | Human |
WASHU | ACTIVE | Genomics of Cyclin E Localization in Breast Cancer Cells | Â | Breast Cancer | Transcriptome, RNA, cDNA | Â | Â | Â | No | Human |
WASHU | ACTIVE | Genomics of Cyclin E Localization in Breast Cancer Cells | Â | Breast Cancer | Whole genome | Â | Â | Â | No | Human |
BROAD | ACTIVE | Germline Cancer | Â | Germline Cancer | Whole exome | Â | Â | 100% | No | Human |
BAYLOR | ACTIVE | Hepatocellular Carcinoma | Â | Hepatocellular Carcinoma | Transcriptome, RNA, cDNA | PRJNA169342 | 165 | 100% | No | Human |
BAYLOR | ACTIVE | Hepatocellular Carcinoma | Â | Hepatocellular Carcinoma | Whole exome | PRJNA169342 | 4644 | 100% | No | Human |
BAYLOR | ACTIVE | Hepatocellular Carcinoma | Â | Hepatocellular Carcinoma | Whole genome | PRJNA169342 | 1000 | 97% | No | Human |
WASHU | ACTIVE | Hepatocellular Carcinoma | Â | Liver Cancer | Targeted sequencing (non-exome) | PRJNA247815 | 684 | 87% | No | Human |
WASHU | ACTIVE | Hepatocellular Carcinoma | Â | Liver Cancer | Transcriptome, RNA, cDNA | PRJNA247815 | 2500 | 96% | No | Human |
WASHU | ACTIVE | Hepatocellular Carcinoma | Â | Liver Cancer | Whole genome | PRJNA247815 | 10000 | 97% | No | Human |
WASHU | ACTIVE | High Risk Neuroblastoma | Â | Neuroblastoma | Whole genome | Â | Â | Â | No | Human |
WASHU | ACTIVE | Human Microbiome Project | 16S Metagenomic Sequencing | Â | 16S | PRJNA43021, PRJNA48489 | Â | Â | No | Human |
WASHU | ACTIVE | Human Microbiome Project | Reference Genomes | Â | Whole genome | PRJNA43021, PRJNA28331 | Â | Â | No | Human |
WASHU | ACTIVE | Human Microbiome Project | Shotgun Metagenomic Sequencing | Â | Whole genome | PRJNA43021, PRJNA43017 | Â | Â | No | Human |
WASHU | ACTIVE | Human Microbiome Project | Transcriptome Sequencing | Â | Transcriptome, RNA, cDNA | PRJNA43021 | Â | Â | No | Human |
WASHU | ACTIVE | Human Microbiome Project | Virus Reference Genomes | Â | Whole genome | PRJNA43021, PRJNA28331 | Â | Â | No | Human |
BAYLOR | ACTIVE | Hydroxyurea in Sickle Cell Disease | Â | Sickle Cell | Whole exome | PRJNA232740 | 4800 | 72% | No | Human |
BAYLOR | ACTIVE | Hydroxyurea in Sickle Cell Disease | Â | Sickle Cell | Whole genome | PRJNA232740 | 1127 | 100% | No | Human |
BROAD | ACTIVE | IBD | Â | IBD | Whole exome | Â | Â | Â | No | Human |
WASHU | ACTIVE | Lung Adenocarcinoma in Never Smokers | Â | Lung Cancer (Never Smokers) | Whole exome | PRJNA247969 | Â | Â | No | Human |
WASHU | ACTIVE | Lung Cancer Susceptibility in Smokers | Â | Lung Cancer (Smokers) | Whole exome | PRJNA242215 | 2000 | 13% | No | Human |
WASHU | ACTIVE | Male Infertility | Â | Male Infertility | Targeted sequencing (non-exome) | PRJNA247999 | 2700 | 97% | No | Human |
BROAD | ACTIVE | Mendelian Consortium | Â | Hirschsprung_Disease | Whole exome | phs000497.v1.p1 | Â | 100% | No | Human |
BROAD | ACTIVE | Mendelian Consortium | Â | Human Hematopoiesis Genetics | Whole exome | phs000474.v1.p1 | Â | 100% | No | Human |
BROAD | ACTIVE | Mendelian Consortium | Â | Inherited Muscle Disease | Whole exome | phs000655.v1.p1 (North); in progress for other cohorts | Â | 81% | No | Human |
BROAD | ACTIVE | Microbial transmissions within human communities (Fiji Comparative) | Â | Microbial transmissions within human communities | 16S | PRJNA217052 | Â | 100% | No | Human |
BAYLOR | ACTIVE | Mining of Legacy Samples | Â | Â | Whole exome | Â | 9600 | 76% | No | Human |
WASHU | ACTIVE | Molecular Basis of Breast Cancer | Â | Breast Cancer | Transcriptome, RNA, cDNA | PRJNA247967 | 2280 | 1% | No | Human |
WASHU | ACTIVE | Molecular Basis of Breast Cancer | Â | Breast Cancer | Whole genome | PRJNA247967 | 20000 | 1% | No | Human |
BROAD | ACTIVE | NIMH/NHGRI Autism Project | Â | Autism | Whole exome | phs000298.v1.p1 | 56000 | 22% | No | Human |
WASHU | ACTIVE | Neoadjuvant Trastuzumab Response in Breast Cancer | Â | Breast Cancer | Transcriptome, RNA, cDNA | PRJNA252719 | 1000 | 0% | No | Human |
WASHU | ACTIVE | Neoadjuvant Trastuzumab Response in Breast Cancer | Â | Breast Cancer | Whole genome | PRJNA252719 | 17000 | 0% | No | Human |
BROAD | ACTIVE | Neurodevelopmental Disorders | ciliopathies | ciliopathies | Whole exome | phs000288.v1.p1 | Â | 99% | No | Human |
BAYLOR | ACTIVE | Obesity and Diabetes Familial Risk | Â | Obesity and Diabetes | Whole exome | PRJNA190072 | 4152 | 100% | No | Human |
BAYLOR | ACTIVE | Pancreatic Cancer | Â | Pancreas | Whole exome | PRJNA171808 | 3539 | 100% | No | Human |
BAYLOR | ACTIVE | Piloting Discovery of Mendelian Disease | Â | Mendelian Disease | Whole exome | Â | 2821 | 100% | Yes | Human |
WASHU | ACTIVE | Progression of Relapsed Small Cell Lung Cancer | Â | Lung Cancer | Transcriptome, RNA, cDNA | PRJNA248450 | 1950 | 22% | No | Human |
WASHU | ACTIVE | Progression of Relapsed Small Cell Lung Cancer | Â | Lung Cancer | Whole exome | PRJNA248450 | 825 | 53% | No | Human |
BAYLOR | ACTIVE | Rare Cancer | Â | Multiple tumor types | Transcriptome, RNA, cDNA | PRJNA241050 | 259 | 100% | No | Human |
BAYLOR | ACTIVE | Rare Cancer | Â | Multiple tumor types | Whole exome | PRJNA241050 | 9000 | 45% | No | Human |
WASHU | ACTIVE | Rare Human Phenotypes | Â | Rare Human Phenotypes | Whole exome | PRJNA247989 | 400 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Bladder cancer | Whole exome | Â | 651 | 100% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Breast cancer | Transcriptome, RNA, cDNA | Â | Â | Â | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Breast cancer | Whole exome | Â | 588 | 94% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Breast cancer | Whole exome | Â | Â | Â | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Colorectal cancer | Transcriptome, RNA, cDNA | Â | 49 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Colorectal cancer | Whole exome | Â | 70 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Lung cancer | Transcriptome, RNA, cDNA | Â | 14 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Lung cancer | Whole exome | Â | 35 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Melanoma | Transcriptome, RNA, cDNA | phs000452 Melanoma Sequencing Project | 77 | 100% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Melanoma | Transcriptome, RNA, cDNA | phs000452 Melanoma Sequencing Project | 189 | 96% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Melanoma | Transcriptome, RNA, cDNA | phs000452 Melanoma Sequencing Project | 1050 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Melanoma | Whole exome | phs000452 Melanoma Sequencing Project | 1036 | 100% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Melanoma | Whole exome | phs000452 Melanoma Sequencing Project | 2100 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Melanoma | Whole exome | phs000452 Melanoma Sequencing Project | 154 | 100% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Renal cell carcinoma | Transcriptome, RNA, cDNA | Â | Â | Â | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Renal cell carcinoma | Whole exome | Â | 126 | 0% | No | Human |
BROAD | ACTIVE | Resistance and Response | Resistance | Testicular cancer | Whole exome | Â | 539 | 0% | No | Human |
WASHU | ACTIVE | Resistance in Non-small Cell Lung Cancer | Â | Lung Cancer | Targeted sequencing (non-exome) | PRJNA248470 | 150 | 30% | No | Human |
WASHU | ACTIVE | Resistance in Non-small Cell Lung Cancer | Â | Lung Cancer | Transcriptome, RNA, cDNA | PRJNA248470 | 1950 | Â | No | Human |
WASHU | ACTIVE | Resistance in Non-small Cell Lung Cancer | Â | Lung Cancer | Whole genome | PRJNA248470 | 13500 | 17% | No | Human |
WASHU | ACTIVE | Sickle Cell Disease | Â | Sickle Cell Patients with Strokes | Whole exome | PRJNA247991 | 3800 | 4% | No | Human |
BAYLOR | ACTIVE | South African Schizophrenia | Â | Schizophrenia | Whole exome | Â | 6000 | 4% | No | Human |
WASHU | ACTIVE | Spontaneous Amyotrophic Lateral Sclerosis (ALS) | Â | Spontaneous Amyotrophic Lateral Sclerosis (ALS) | Targeted sequencing (non-exome) | PRJNA248442 | 250 | 76% | No | Human |
WASHU | ACTIVE | Spontaneous Amyotrophic Lateral Sclerosis (ALS) | Â | Spontaneous Amyotrophic Lateral Sclerosis (ALS) | Transcriptome, RNA, cDNA | PRJNA248442 | 1000 | 74% | No | Human |
WASHU | ACTIVE | Spontaneous Amyotrophic Lateral Sclerosis (ALS) | Â | Spontaneous Amyotrophic Lateral Sclerosis (ALS) | Whole genome | PRJNA248442 | 3900 | 96% | No | Human |
BAYLOR | ACTIVE | TCGA | Breast Benchmark | Breast | Transcriptome, RNA, cDNA | PRJNA74949 | 61 | 100% | No | Human |
BAYLOR | ACTIVE | TCGA | Breast Benchmark | Breast | Whole genome | PRJNA74949 | 427 | 100% | No | Human |
BROAD | ACTIVE | TCGA | TCGA Whole Genome Sequencing | Multiple Tumor Types | Whole genome | cgHUB | 85580 | 100% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Adrenocortical carcinoma | Whole exome | PRJNA74949 | 1835 | 100% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | B-cell Lymphoma | Whole exome | PRJNA74949 | 9000 | 6% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | B-cell Lymphoma | Whole genome | PRJNA74949 | 2182 | 100% | No | Human |
WASHU | ACTIVE | TCGA | Â | Breast | Targeted sequencing (non-exome) | PRJNA74949 | 800 | 73% | No | Human |
WASHU | ACTIVE | TCGA | Â | Breast | Whole exome | PRJNA74949 | 19500 | 86% | No | Human |
WASHU | ACTIVE | TCGA | Â | Breast | Whole genome | PRJNA74949 | 29000 | 47% | No | Human |
WASHU | ACTIVE | TCGA | Â | Cervical | Targeted sequencing (non-exome) | PRJNA74949 | 50 | 2% | No | Human |
WASHU | ACTIVE | TCGA | Â | Cervical | Whole exome | PRJNA74949 | 4000 | 74% | No | Human |
WASHU | ACTIVE | TCGA | Â | Cervical | Whole genome | PRJNA74949 | 6000 | 100% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Colon | Whole exome | PRJNA74949 | 14314 | 100% | Yes | Human |
BAYLOR | ACTIVE | TCGA | Â | Colon | Whole genome | PRJNA74949 | 15000 | 99% | Yes | Human |
WASHU | ACTIVE | TCGA | Â | Endometrial | Targeted sequencing (non-exome) | PRJNA74949 | 1500 | 41% | No | Human |
WASHU | ACTIVE | TCGA | Â | Endometrial | Whole exome | PRJNA74949 | 11000 | 61% | No | Human |
WASHU | ACTIVE | TCGA | Â | Endometrial | Whole genome | PRJNA74949 | 16000 | 62% | No | Human |
WASHU | ACTIVE | TCGA | Â | Esophageal | Whole exome | PRJNA74949 | 5000 | 0% | No | Human |
WASHU | ACTIVE | TCGA | Â | Esophageal | Whole genome | PRJNA74949 | 6300 | 0% | No | Human |
WASHU | ACTIVE | TCGA | Â | GBM | Whole genome | PRJNA74949 | 6000 | 64% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Head and Neck | Whole genome | PRJNA74949 | 12214 | 100% | Yes | Human |
BAYLOR | ACTIVE | TCGA | Â | Kidney Chromophobe | Whole exome | PRJNA74949 | 1312 | 100% | Yes | Human |
BAYLOR | ACTIVE | TCGA | Â | Kidney Chromophobe | Whole genome | PRJNA74949 | 4821 | 100% | Yes | Human |
BAYLOR | ACTIVE | TCGA | Â | Kidney Papillary | Whole exome | PRJNA74949 | 2250 | 72% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Kidney Papillary | Whole genome | PRJNA74949 | 3418 | 100% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Liver | Whole exome | PRJNA74949 | 9000 | 62% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Liver | Whole genome | PRJNA74949 | 16000 | 17% | No | Human |
WASHU | ACTIVE | TCGA | Â | Ovarian | Targeted sequencing (non-exome) | PRJNA74949 | 200 | 83% | No | Human |
WASHU | ACTIVE | TCGA | Â | Ovarian | Whole exome | PRJNA74949 | 8600 | 100% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Ovarian | Whole genome | PRJNA74949 | 6000 | 91% | Yes | Human |
WASHU | ACTIVE | TCGA | Â | Ovarian | Whole genome | PRJNA74949 | 50 | 84% | No | Human |
BAYLOR | ACTIVE | TCGA | Â | Rectal | Whole exome | PRJNA74949 | 5000 | 93% | Yes | Human |
BAYLOR | ACTIVE | TCGA | Â | Rectal | Whole genome | PRJNA74949 | 4655 | 100% | Yes | Human |
BAYLOR | ACTIVE | TCGA | Â | Renal | Whole exome | PRJNA74949 | 7049 | 100% | Yes | Human |
BAYLOR | ACTIVE | TCGA | Â | Renal | Whole genome | PRJNA74949 | 16200 | 68% | Yes | Human |
WASHU | ACTIVE | TCGA | Â | Sarcoma | Whole exome | PRJNA74949 | 5000 | 68% | No | Human |
WASHU | ACTIVE | TCGA | Â | Sarcoma | Whole genome | PRJNA74949 | 16500 | 61% | No | Human |
WASHU | ACTIVE | Transition from Pre-Invasive to Invasive Cervical Cancer | Â | Cervical | Whole genome | Â | Â | Â | No | Human |
WASHU | ACTIVE | Treatment Response and Survival in Prostate Cancer | Â | Prostate Cancer | Transcriptome, RNA, cDNA | Â | Â | Â | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | AML | Targeted sequencing (non-exome) | PRJNA74781, phs000159.v4.p2 | 800 | 74% | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | AML | Transcriptome, RNA, cDNA | PRJNA74781, phs000159.v4.p2 | 600 | 87% | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | AML | Whole exome | PRJNA74781, phs000159.v4.p2 | 50 | 76% | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | AML | Whole genome | PRJNA74781, phs000159.v4.p2 | 3000 | 82% | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Aggressive Prostate Carcinoma | Transcriptome, RNA, cDNA | phs000447.v1.p1 (Prostate Cancer Genome Sequencing Project) | Â | Â | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Aggressive Prostate Carcinoma | Whole genome | phs000447 | Â | Â | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Brain Mets | Whole exome | Â | 4950 | 48% | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Brain Mets | Whole exome | Â | 2304 | 67% | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | Breast Cancer | Targeted sequencing (non-exome) | PRJNA89531 | 1500 | 93% | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | Breast Cancer | Transcriptome, RNA, cDNA | PRJNA89531 | 50 | 36% | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | Breast Cancer | Whole exome | PRJNA89531 | 100 | 62% | No | Human |
WASHU | ACTIVE | Tumor Sequencing Project | Â | Breast Cancer | Whole genome | PRJNA89531 | 19000 | 96% | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Breast cancer: epidemiology | Whole exome | Â | Â | Â | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Colon cancer: epidemiology | Whole exome | phs000722.v1.p1 | 22200 | 4% | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Esophageal Adenocarcinoma | Whole exome | phs000598.v2.p2 Exome Sequencing of Esophageal Adenocarcinoma | Â | Â | Yes | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Melanoma, Uveal | Whole exome | phs000452 | 1387 | 78% | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Mesothelioma | Whole exome | Â | 555 | 100% | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Prostate Cancer in African Americans | Whole exome | phs000447 | 3241 | 39% | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Prostate Cancer in African Americans | Whole exome | phs000447 | Â | Â | No | Human |
BROAD | ACTIVE | Tumor Sequencing Project | Â | Prostate Cancer, Small Cell | Whole exome | Â | Â | Â | No | Human |
BROAD | ACTIVE | Type 2 Diabetes Exome Sequencing | Â | Diabetes | Whole exome | Â | Â | 100% | No | Human |
BAYLOR | ACTIVE | 200 Mammals | Â | Killer whale (Orcinus orca) | Whole genome | PRJNA167475 | 122 | 100% | Yes | Non-Human |
BAYLOR | ACTIVE | 200 Mammals | Â | Walrus (Odobenus rosmarus) | Whole genome | PRJNA167474 | 600 | 100% | Yes | Non-Human |
BAYLOR | ACTIVE | Adder Snake | Â | Adder Snake (Vipera berus) | Whole genome | PRJNA170536 | 119 | 100% | No | Non-Human |
WASHU | ACTIVE | Anthelmintic Resistance in Parasitic Nematodes | Drug resistant isolates of Cooperia punctata | Cooperia punctata | Transcriptome, RNA, cDNA | PRJNA219635 | 100 | 39% | No | Non-Human |
WASHU | ACTIVE | Anthelmintic Resistance in Parasitic Nematodes | Drug resistant isolates of Necator americanus | New World hookworm (Necator americanus) | Whole genome | PRJNA219639 | 100 | 100% | No | Non-Human |
WASHU | ACTIVE | Anthelmintic Resistance in Parasitic Nematodes | Drug resistant isolates of Telodorsagia circumcincta | Brown stomach worm (Telodorsagia circumcincta) | Whole genome | PRJNA219637 | 100 | 65% | No | Non-Human |
BROAD | ACTIVE | Canine Tumor Sequencing - Pilot Project | Lymphoma | Canis familiaris/Dog | Whole exome | PRJNA247491 | Â | Â | No | Non-Human |
BROAD | ACTIVE | Canine Tumor Sequencing - Pilot Project | Lymphoma | Canis familiaris/Dog | Whole genome | PRJNA247491 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Canine Tumor Sequencing - Pilot Project | Melanoma | Canis familiaris/Dog | Whole exome | PRJNA247491 | Â | Â | No | Non-Human |
BROAD | ACTIVE | Canine Tumor Sequencing - Pilot Project | Osteosarcoma | Canis familiaris/Dog | Whole exome | PRJNA247491 | Â | Â | No | Non-Human |
BROAD | ACTIVE | Canine Tumor Sequencing - Pilot Project | Osteosarcoma | Canis familiaris/Dog | Whole genome | PRJNA247491 | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Community Aquired MRSA Infection | Â | CA-MRSA | Whole exome | PRJNA247964 | 5000 | 31% | No | Non-Human |
WASHU | ACTIVE | Community Aquired MRSA Infection | Â | MRSA Bacteria | Whole genome | PRJNA247964 | 1100 | 2% | No | Non-Human |
BROAD | ACTIVE | Defining the Transcriptome of Nine Vertebrate Genomes Using RNA-Seq | Â | Multiple | Transcriptome, RNA, cDNA | Multiple | Â | Â | Yes | Non-Human |
BROAD | ACTIVE | Dog | Â | Canis familiaris/Dog | BACs, clones, linked-pair libraries | Â | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Ecdysozoan Sequencing | Â | Marine Worm (Priapulus caudatus) | Transcriptome, RNA, cDNA | PRJNA20497 | 50 | 12% | No | Non-Human |
WASHU | ACTIVE | Ecdysozoan Sequencing | Â | Marine Worm (Priapulus caudatus) | Whole genome | PRJNA20497 | 200 | 72% | No | Non-Human |
BAYLOR | ACTIVE | Echinoderm Sequencing | Brittle Star Genome | Spiny brittle star (Ophiothrix spiculata) | Whole genome | PRJNA182997 | 340 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Echinoderm Sequencing | Green Sea Urchin Genome | Green Sea urchin (Lytechinus variegatus) | Whole genome | PRJNA62399 | 40 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Echinoderm Sequencing | Sea Cucumber Genome | Warty Sea Cucumber (Parastichopus parvimensis) | Whole genome | PRJNA182998 | 190 | 100% | No | Non-Human |
BROAD | ACTIVE | Evolution of the Human Proteome | Â | Latimeria chalumnae/Coelacanth | Whole genome | PRJNA56111 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Evolution of the Human Proteome | Â | Lepisosteus oculatus/Spotted gar | Transcriptome, RNA, cDNA | PRJNA247500 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Evolution of the Human Proteome | Â | Lepisosteus oculatus/Spotted gar | Whole genome | PRJNA68247 | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Blood Fluke (Schistosoma mansoni) | Transcriptome, RNA, cDNA | PRJNA247810 | 80 | 2% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Human lung fluke (Paragonimus westermani) | Whole genome | PRJNA219632 | 150 | 16% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Liver fluke (Opisthorchis viverrini) | Whole genome | PRJNA230518 | 100 | 16% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Lung fluke (Paragonimus kellicotti) | Whole genome | PRJNA179523 | 250 | 91% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Lung fluke (Paragonimus miyazakii) | Transcriptome, RNA, cDNA | PRJNA245325 | 100 | 59% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Lung fluke (Paragonimus miyazakii) | Whole genome | PRJNA245325 | 100 | 34% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Sheep liver fluke (Fasciola gigantica) | Whole genome | PRJNA230515 | 150 | 36% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Sheep liver fluke (Fasciola hepatica) | Transcriptome, RNA, cDNA | PRJNA179522 | 50 | 76% | No | Non-Human |
WASHU | ACTIVE | Food-Bourne Trematodiases | Â | Sheep liver fluke (Fasciola hepatica) | Whole genome | PRJNA179522 | 400 | 94% | No | Non-Human |
BROAD | ACTIVE | Fungal Genome Initiative | Â | Black Yeasts | Whole genome | PRJNA76691 | Â | 42% | No | Non-Human |
BROAD | ACTIVE | Fungal Genome Initiative | Â | Cryptococcus neoformans, serotype A and B | Whole genome | PRJNA89741? | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Genetic Model for Vertebrate Development | Â | Common Garter Snake (Thamnophis sirtalis) | Transcriptome, RNA, cDNA | PRJNA189551 | 200 | 0% | No | Non-Human |
WASHU | ACTIVE | Genetic Model for Vertebrate Development | Â | Common Garter Snake (Thamnophis sirtalis) | Whole genome | PRJNA189551 | 400 | 85% | No | Non-Human |
BAYLOR | ACTIVE | Genetic Variation in Essential Laboratory Primates | Â | Rhesus Macaque (Macaca mulatta) and Cynomolgus Macaque (Macaca fascicularis) | Whole exome | PRJNA251548Â | 156 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Genetic Variation in Essential Laboratory Primates | Â | Rhesus Macaque (Macaca mulatta) and Cynomolgus Macaque (Macaca fascicularis) | Whole genome | PRJNA251548Â | 11909 | 100% | No | Non-Human |
BROAD | ACTIVE | Genomic Basis of Vertebrate Diversity | Â | Gasterosteus aculeatus/Stickleback | Whole genome | PRJNA247503 | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Hookworm | Â | New World hookworm (Necator americanus Anhui) | Transcriptome, RNA, cDNA | PRJNA72135 | 25 | 76% | No | Non-Human |
WASHU | ACTIVE | Hookworm | Â | New World hookworm (Necator americanus Anhui) | Whole genome | PRJNA72135 | 50 | 46% | No | Non-Human |
WASHU | ACTIVE | Host Immunological Markers | Â | Â | Transcriptome, RNA, cDNA | Â | 750 | Â | No | Non-Human |
WASHU | ACTIVE | Host Parasite Interaction | Â | Â | Transcriptome, RNA, cDNA | Â | 150 | Â | No | Non-Human |
BROAD | ACTIVE | Human Microbiome Project | Human Microbiome Project -Eukaryotes | Reference Genomes | Whole genome | SRA STOOL06P6B | Â | 100% | No | Non-Human |
BAYLOR | ACTIVE | I5K | Â | Multiple species | Transcriptome, RNA, cDNA | PRJNA163973 | 600 | 52% | No | Non-Human |
BAYLOR | ACTIVE | I5K | Â | Multiple species | Whole genome | PRJNA163973 | 4953 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Identification of Mutation in a Rat Model for Human Parkinson’s Disease |  | Parkinson's Disease | Whole genome | PRJNA253728 | 475 | 100% | No | Non-Human |
WASHU | ACTIVE | Infectious Disease Genomics Initiative | BK Virus Nephropathy | Â | Whole genome | Â | 100 | Â | No | Non-Human |
WASHU | ACTIVE | Infectious Disease Genomics Initiative | Clostridium difficile Hospital Infection Control | Clostridium difficile | Whole genome | Â | 1600 | 22% | No | Non-Human |
WASHU | ACTIVE | Infectious Disease Genomics Initiative | Influenza A | Influenza A | Whole genome | Â | 100 | 0% | No | Non-Human |
WASHU | ACTIVE | Infectious Disease Genomics Initiative | Influenza B | Influenza B | Whole genome | Â | 100 | 1% | No | Non-Human |
WASHU | ACTIVE | Infectious Disease Genomics Initiative | RBEL Microbiome | Â | Whole genome | Â | 100 | Â | No | Non-Human |
WASHU | ACTIVE | Infectious Disease Genomics Initiative | Rotavirus | Â | Whole genome | Â | 100 | Â | No | Non-Human |
WASHU | ACTIVE | Infectious Disease Genomics Initiative | Short Bowel Microbiome | Â | Whole genome | Â | 100 | Â | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers | Genetic Model for Oral Cancer | Oral Cancer | Whole exome | PRJNA247825 | 90 | 89% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers | Inducible Mouse Models of Human Colon Cancer | Colon Cancer | Transcriptome, RNA, cDNA | PRJNA247961 | 1200 | 34% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers | Inducible Mouse Models of Human Colon Cancer | Colon Cancer | Whole genome | PRJNA247961 | 6000 | 81% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers | Murine STAT1 deficient ER positive Luminal Mammary Tumors | Breast Cancer | Whole genome | PRJNA248457 | 8000 | 85% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers | TP53 Knock out Models of Human Breast Cancer | Breast Cancer | Whole exome | PRJNA247955 | 350 | 81% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers | TP53 Knock out Models of Human Breast Cancer | Breast Cancer | Whole genome | PRJNA247955 | 1000 | 95% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers 2 | Mouse Models of Sarcoma Targeting Kras and p53 | Sarcoma | Targeted sequencing (non-exome) | PRJNA248466 | 100 | 52% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers 2 | Mouse Models of Sarcoma Targeting Kras and p53 | Sarcoma | Transcriptome, RNA, cDNA | PRJNA248466 | 100 | 35% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Human Cancers 2 | Mouse Models of Sarcoma Targeting Kras and p53 | Sarcoma | Whole exome | PRJNA248466 | 640 | 5% | No | Non-Human |
WASHU | ACTIVE | Mouse Models of Lung Cancer | Â | Lung Cancer | Whole genome | Â | Â | Â | No | Non-Human |
BROAD | ACTIVE | Mouse Models of colitis | Â | Mouse Models of colitis | Whole genome | PRJNA176009 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Mouse Mutant Resequencing Initiative | Â | Mus musculus/Mouse | Targeted sequencing (non-exome) | PRJNA247497 | Â | Â | No | Non-Human |
BROAD | ACTIVE | Mouse Mutant Resequencing Initiative | Â | Mus musculus/Mouse | Whole exome | PRJNA247497 | 546 | 56% | No | Non-Human |
BROAD | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Elephant diversity project | Loxodonta africana/Elephant | Whole genome | PRJNA247496 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Elephant reference genome | Loxodonta africana/Elephant | Whole genome | PRJNA12569 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Rabbit diversity project | Oryctolagus cuniculus/Rabbit | Whole genome | PRJNA242290 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Rabbit reference genome | Oryctolagus cuniculus/Rabbit | Whole genome | PRJNA12819 | Â | 100% | No | Non-Human |
BAYLOR | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Top-up of Remaining 2X Mammals | Megabat (Pteropus vampyrus) | Whole genome | PRJNA20325 | Â | 100% | No | Non-Human |
BAYLOR | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Top-up of Remaining 2X Mammals | Ord's kangaroo rat (Dipodomys ordii) | Whole genome | PRJNA20385 | 346 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Top-up of Remaining 2X Mammals | Rock Hyrax (Procavia capensis) | Whole genome | PRJNA13972 | 474 | 100% | No | Non-Human |
WASHU | ACTIVE | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Flying Lemur (Galeopterus variegatus) | Transcriptome, RNA, cDNA | PRJNA20511 | 30 | Â | No | Non-Human |
BROAD | ACTIVE | Origins of multicellularity | Amoebidium parasiticum | Amoebidium parasiticum | Whole genome | PRJNA189477 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Origins of multicellularity | Ministeria vibrans | Ministeria vibrans | Whole genome | PRJNA39421 | 20 | 100% | No | Non-Human |
BROAD | ACTIVE | Origins of multicellularity | Â | Allomyces macrogynus, Spizellomyces punctatus, Mortierella verticillata, Sphaeroforma arctica, Capsaspora owczarzaki, Thecamonas trahens, Salpingoeca rosetta, Fonticula alba | Whole genome | PRJNA20563, PRJNA37881, PRJNA20603, PRJNA20463, PRJNA20341, PRJNA37929, PRJNA37927, PRJNA189482, | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Parasitic Nematode Glands | Â | Â | Transcriptome, RNA, cDNA | Â | 4 | 32% | No | Non-Human |
WASHU | ACTIVE | Pathogen Genomics and Global Health | Â | Metagenomics | 16S | Â | 10 | Â | No | Non-Human |
WASHU | ACTIVE | Pathogen Genomics and Global Heath | Â | Ascaris lumbricoides | Whole genome | PRJNA230513 | 40 | 77% | No | Non-Human |
WASHU | ACTIVE | Pathogen Genomics and Global Heath | Â | Helminths Infections | Whole genome | Â | 1000 | Â | No | Non-Human |
WASHU | ACTIVE | Pathogen Genomics and Global Heath | Â | Onchocerca flexuosa | Whole genome | PRJNA230512 | 20 | 66% | No | Non-Human |
WASHU | ACTIVE | Pathogen Genomics and Global Heath | Â | Onchocerca volvulus | Whole genome | PRJNA219638 | 150 | 87% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tetse Fly (Glossina austeni) | Whole genome | PRJNA189552 | 100 | 60% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tetse Fly (Glossina brevipalpis) | Transcriptome, RNA, cDNA | PRJNA182187 | 100 | 75% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tetse Fly (Glossina brevipalpis) | Whole genome | PRJNA182187 | 100 | 57% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tetse Fly (Glossina fuscipes) | Whole genome | PRJNA172853 | 400 | 81% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tetse Fly (Glossina pallidipes) | Transcriptome, RNA, cDNA | PRJNA184812 | 50 | 0% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tetse Fly (Glossina pallidipes) | Whole genome | PRJNA184812 | 100 | 45% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tsetse Fly (multiple Glossina) | Transcriptome, RNA, cDNA | PRJNA188117, PRJNA189552, PRJNA182187, PRJNA172853, PRJNA184812 | 300 | 87% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Glossina Genome Projects | Tsetse Fly (multiple Glossina) | Whole genome | PRJNA188117, PRJNA189552, PRJNA182187, PRJNA172853, PRJNA184812 | 500 | 52% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Pathogenomics of Trypanosomatid parasites | Trypanosomatid parasites | Whole genome | PRJNA176381, PRJNA165885, PRJNA59941, PRJNA50301, PRJNA165959, PRJNA169673, PRJNA50299, PRJNA165955, PRJNA169676, PRJNA169675, PRJNA165953, PRJNA169677, PRJNA50303, PRJNA50493, PRJNA192710, PRJNA192711, PRJNA192717, PRJNA165887, PRJNA192703, PRJNA192712, PRJNA198812 | 400 | 40% | No | Non-Human |
BROAD | ACTIVE | Pathogens and Vectors | Â | Genome Analysis of Vectorial Capacity in Major Anopheles Vectors of Malaria Parasites | Whole genome | PRJNA67129 | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Â | Sand Fly (Phlebotomus bergeroti) | Whole genome | PRJNA252709 | 30 | 51% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Â | Sand Fly (Phlebotomus duboscqi) | Whole genome | PRJNA252711 | 30 | 55% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Â | Sand Fly (Phlebotomus papatasi) | Transcriptome, RNA, cDNA | PRJNA20293 | 100 | 63% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Â | Sand Fly (Phlebotomus papatasi) | Whole genome | PRJNA20293 | 150 | 94% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Â | Stable Fly (Stomoxys calcitrans) | Transcriptome, RNA, cDNA | PRJNA188117 | 100 | 39% | No | Non-Human |
WASHU | ACTIVE | Pathogens and Vectors | Â | Stable Fly (Stomoxys calcitrans) | Whole genome | PRJNA188117 | 200 | 87% | No | Non-Human |
BROAD | ACTIVE | Prairie Vole | Â | Microtus ochrogaster/Prairie vole | Whole genome | PRJNA72443 | Â | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Buff-headed Capuchin Reference Genome | Buff-headed capuchin (Cebus xanthrosternos) | Whole genome | PRJNA249084Â | 600 | 0% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Colobus Reference Genome | Black colobus (Colobus angolensis) | Whole genome | PRJNA251421 | 600 | 86% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Drill Reference Genome | Drill (Mandrillus leucophaeus) | Whole genome | PRJNA251423 | 1000 | 33% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Gelada Monkey Reference Genome | Gelada monkey (Theropithecus gelada) | Whole genome | PRJNA251424 | 600 | 0% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Mouse Lemur Diversity Panel | Gray mouse lemur (Microcebus murinus) | Whole genome | PRJNA19967 | 835 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Mouse Lemur Reference Genome | Gray mouse lemur (Microcebus murinus) | Whole genome | PRJNA19967 | 465 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Owl Monkey Reference Genome | Owl monkey (Aotus nancymaae) | Whole genome | PRJNA251539Â | 600 | 0% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Patas monkey Reference Genome | Patas monkey (Erythrocebus patas) | Whole genome | PRJNA251426Â | 600 | 0% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Pig-tailed Macaque Diversity Panel | Pig-tailed Macaque (Macaca nemestrina) | Whole genome | PRJNA251427 | 458 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Pig-tailed Macaque Reference Genome | Pig-tailed Macaque (Macaca nemestrina) | Whole genome | PRJNA251427 | 628 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Primate RNAseq Survey | Multiple species | Transcriptome, RNA, cDNA | PRJNA251544 | 2411 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Sifaka Lemur Diversity Panel | Sifaka Lemur (Propithecus coquereli) | Whole genome | PRJNA251429 | 749 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Sifaka Lemur Reference Genome | Sifaka Lemur (Propithecus coquereli) | Whole genome | PRJNA251429 | 592 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Sooty Mangabey Diversity Panel | Sooty Mangabey (Cercocebus atys) | Whole genome | PRJNA157077 | 728 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | Sooty Mangabey Reference Genome | Sooty mangabey (Cercocebus atys) | Whole genome | PRJNA157077 | 241 | 100% | No | Non-Human |
BAYLOR | ACTIVE | Primate Genomes | White-fronted Capuchin Reference Genome | White-fronted capuchin (Cebus albifrons) | Whole genome | PRJNA251434 | 600 | 0% | No | Non-Human |
WASHU | ACTIVE | Primate Genomes | Â | Tarsier (Tarsier syrichta) | Transcriptome, RNA, cDNA | PRJNA20339 | 50 | 15% | No | Non-Human |
WASHU | ACTIVE | Primate Genomes | Â | Vervet (Chlorocebus aethiops) | Whole genome | PRJNA176010, PRJNA168527, PRJNA168621, PRJNA168522, PRJNA168521, PRJNA168520, PRJNA168472 | 9000 | 98% | No | Non-Human |
BROAD | ACTIVE | Sea slug | Â | Aplysia californica | Transcriptome, RNA, cDNA | PRJNA77701 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Sea slug | Â | Aplysia californica | Whole genome | PRJNA13635 | Â | 100% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Bovine Lungworm (Dictyocaulus viviparus) | Transcriptome, RNA, cDNA | PRJNA72587 | 155 | 77% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Bovine Lungworm (Dictyocaulus viviparus) | Whole genome | PRJNA72587 | 100 | 37% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Bovine Stomach Worm (Ostertagia ostertagi) | Transcriptome, RNA, cDNA | PRJNA72577 | 18 | 56% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Bovine Stomach Worm (Ostertagia ostertagi) | Whole genome | PRJNA72577 | 200 | 70% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Intestinal Hookworm (Ancylostoma ceylanicum) | Transcriptome, RNA, cDNA | PRJNA12860 | 400 | 77% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Nodule Worm (Oesophagostomum dentatum) | Transcriptome, RNA, cDNA | PRJNA72579, PRJNA20459 | 120 | 97% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Nodule Worm (Oesophagostomum dentatum) | Whole genome | PRJNA72579, PRJNA20459 | 125 | 60% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Small intestinal worm (Cooperia oncophora) | Transcriptome, RNA, cDNA | PRJNA20299, PRJNA188323 | 50 | 36% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Small intestinal worm (Cooperia oncophora) | Whole genome | PRJNA20299, PRJNA72571 | 140 | 68% | No | Non-Human |
WASHU | ACTIVE | Strongylid Nematode | Â | Thread-Necked Worm (Nematodirus battus) | Whole genome | PRJNA20455, PRJNA86621 | 100 | 36% | No | Non-Human |
WASHU | ACTIVE | Synovial and Clear Cell Sarcoma Mouse Models | Â | Sarcoma | Targeted sequencing (non-exome) | PRJNA247995 | 50 | 0% | No | Non-Human |
WASHU | ACTIVE | Synovial and Clear Cell Sarcoma Mouse Models | Â | Sarcoma | Transcriptome, RNA, cDNA | PRJNA247995 | 250 | 0% | No | Non-Human |
WASHU | ACTIVE | Synovial and Clear Cell Sarcoma Mouse Models | Â | Sarcoma | Whole exome | PRJNA247995 | 1200 | 0% | No | Non-Human |
BROAD | ACTIVE | Tetrahymena comparative genome project | Â | Tetrahymena thermophila, Tetrahymena elliotti, Tetrahymena borealis, Tetrahymena malaccensis | Whole genome | PRJNA177802 | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Tilapia cichlid | Â | Multiple | Transcriptome, RNA, cDNA | Multiple | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Tilapia cichlid | Â | Multiple | Whole genome | Multiple | Â | 100% | No | Non-Human |
BROAD | ACTIVE | Trichophyton | Â | T. rubrum | Whole genome | PRJNA186851 | Â | 100% | No | Non-Human |
BAYLOR | HISTORICAL | 1000 Genomes | Pilot 1 | Â | Whole genome | PRJNA28911 | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | 1000 Genomes | Pilot 2 | Â | Whole genome | PRJNA28919 | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | 1000 Genomes | Pilot 3 | Â | Targeted sequencing (non-exome) | PRJNA28917 | Â | Â | Yes | Human |
BROAD | HISTORICAL | 1000 Genomes | Â | Â | Deep sequencing of two mother-father-adult child trios | Â | Â | Â | Yes | Human |
BROAD | HISTORICAL | 1000 Genomes | Â | Â | Sequencing ~2X coverage in ~180 individuals | Â | Â | Â | Yes | Human |
BROAD | HISTORICAL | 1000 Genomes | Â | Â | Sequencing ~4X coverage in at least 1200 individuals | Â | Â | Â | Yes | Human |
BROAD | HISTORICAL | 1000 Genomes | Â | Â | Targeted sequencing of ~1000 gene regions in ~1000 individuals | Â | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | ARRA Autism Sequencing Collaboration | Â | Autism | Whole exome | PRJNA74861 | Â | Â | Yes | Human |
BROAD | HISTORICAL | Addressing major unanswered questions in prostate cancer |  | Prostate Cancer |  | phs000330.v1.p1 The Genomic Complexity of Primary Human Prostate Cancer |  |  | Yes | Human |
BROAD | HISTORICAL | Allelic Spectrum of Common Disease | Â | Cardiovascular Disease | 76 genes in 4286 individuals | Framingham Heart Study Allelic Spectrum Project and JHS Allelic Spectrum Project | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | Allelic Spectrum of Common Disease | Â | Schizophrenia | Targeted sequencing (non-exome) | Â | Â | Â | Yes | Human |
BROAD | HISTORICAL | Amish Dystonia & Microcephaly with Chorioretinopathy | Â | Dystonia, Microcephaly with Chorioretinopathy | 3 affected individuals and 2 unaffected family members for each disease using exome sequencing | phs000623.v1.p1 Rare Mendelian Disease in Old Order Amish and Mennonite Patients | Â | Â | Yes | Human |
BROAD | HISTORICAL | Autism | Â | Â | Â | ARRA Autism Sequencing Collaboration | Â | Â | No | Human |
BROAD | HISTORICAL | BI Tumor Sequencing Proposal (TSP) | Â | Multiple | >5000 T/N pairs by whole exome or genome sequencing | Â | Â | Â | Â | Human |
BROAD | HISTORICAL | Breast and colon cancer in top-tier epidemiologic cohorts and cooperative group trials | Â | Breast Cancer, Colon Cancer | Â | phs000722.v1.p1 Whole Exome Sequencing of Colorectal Cancer Epidemiologic Cohorts | Â | Â | No | Human |
BROAD | HISTORICAL | Chronic Lymphocytic Leukemia (CLL) | Â | CLL | 91 CLL samples with matched germline controls by exome sequencing | Â | Â | Â | Â | Human |
BROAD | HISTORICAL | Deep extension of exome sequencing in Type 2 Diabetes | Â | Type 2 Diabetes (T2D) | Â | T2D-GENES Exome Sequencing Study in African Americans, Starr County T2D-GENES Exome Sequencing Study, JHS T2D-GENES Exome Sequencing Study, San Antonio Family Studies Substudy- T2d-GENES Exome Sequencing Study , Metabolic Syndrome in Men (METSIM) Study Substudy - METSIM T2D-GENES Exome Sequencing Study Singapore T2D-GENES Exome Sequencing Study Korean Association Resource (KARE) T2D-GENES Exome Sequencing Study UK South Asian T2D-GENES Exome Sequencing Study Ashkenazi T2D-GENES Exome Sequencing Study | Â | Â | Yes | Human |
BROAD | HISTORICAL | Drug -Induced Liver Injury | Â | Augmentin induced liver injury (DILI) | 75 cases of DILI using exome sequencing | Â | Â | Â | Yes | Human |
BROAD | HISTORICAL | Early onset Myocardial Infarction (MI) | Â | Â | Â | MIGen_ExS: Atherosclerosis Thrombosis and Vascular Biology; MIGen_ExS: Ottawa Heart; MIGen_ExS: PROCARDIS; MIGen_ExS: Regicor; MIGen_ExS: German Heart Center in Munich; MIGen_ExS: JHS; MIGen_ExS: PROMIS; MIGen_ExS: University Medical Centre Schleswig-Holstein | Â | Â | No | Human |
BROAD | HISTORICAL | Esophageal Adenocarcinoma Genome Sequencing Project | Â | Esophageal Adenocarcinoma | 100 Esophageal Adenocarcinoma T/N pairs by combination of whole exome (85) and whole genome (15) sequencing | phs000598.v2.p2 Exome Sequencing of Esophageal Adenocarcinoma | Â | Â | Yes | Human |
BROAD | HISTORICAL | Exome Seqeuncing at Gleeson Lab/BI on Ciliopathy | Â | Ciliopathy | Exome sequencing for 500 ciliopathy patients | Ciliopathies Exome Sequencing Initiative | Â | Â | No | Human |
BROAD | HISTORICAL | Finnish BMI Extremes | Â | Obesity | 47 individuals from tails of BMI distributions selected from an eastern Finnish population using exome sequencing | Â | Â | Â | Â | Human |
BROAD | HISTORICAL | GEI Studies | Â | Breast cancer | Â | Â | Â | Â | Â | Human |
BROAD | HISTORICAL | GEI Studies | Â | Crohn's and colitis | Â | NIDDK to initiate dbGAP | Â | Â | Yes | Human |
 | HISTORICAL | Genomics of familial Hodgkin lymphoma and multiple sclerosis |  | Hodgkin lymphoma, Multiple Sclerosis |  |  |  |  | Dropped | Human |
 | HISTORICAL | Germline risk variants in cancer |  |  |  |  |  |  | Dropped | Human |
BROAD | HISTORICAL | HDL-C Exome Sequencing | Â | Extremly High High- Density Lipoprotein Cholesterol (HDL-C) | 48 individuals with extremely high HDL-C and 48 individuals with low HDL-C using exome sequencing | Genetics of High HDL Cholesterol | Â | Â | Yes | Human |
WASHU | HISTORICAL | Human Structural Variation | Â | N/A | Sequencing ~0.4X coverage in fosmid ends from up to 21 individuals and BAC ends for a few additional individuals | PRJNA29893 | Â | Â | No | Human |
BROAD | HISTORICAL | Impact of subclonal mutations in indolent B cell malignancies | Â | Â | Â | phs000435.v1.p1 Whole Exome Sequencing of Chronic Lymphocytic Leukemia | Â | Â | No | Human |
BROAD | HISTORICAL | Lung Adenocarcinoma Tumor Exome Sequencing Project | Â | Lung Adenocarcinoma | 150 Lung Adenocarcinoma T/N by whole exome sequencing | phs000488.v1.p1 Genomic Sequencing of Lung Adenocarcinoma" | Â | Â | Yes | Human |
BROAD | HISTORICAL | Medulloblastoma (Pediatric) Sequencing Project | Â | Medulloblastoma (Pediatric) | 100 Pediatric Medulloblastoma T/N pairs by whole exome sequencing (85) and whole genome sequencing (15) | phs000504.v2.p2 Medulloblastoma exome sequence analysis | Â | Â | Yes | Human |
BROAD | HISTORICAL | Melanoma Genome Sequencing Project | Â | Melanoma | 150 Melanoma T/N pairs by combination of whole exome (135) and whole genome (15) sequencing | phs000452.v1.p1 Melanoma Genome Sequencing Project | Â | Â | Yes | Human |
BROAD | HISTORICAL | Mendelian Disorders | Â | Atrial Fibrillation, Dominant (ATFB2) | Directed sequencing of all exons in mapped interval | Â | Â | Â | Â | Human |
BROAD | HISTORICAL | Mendelian Disorders | Â | Joubert Syndrome (JBTS1; JBTS2; JBTS4; JBTS5) | Directed sequencing of all exons in mapped interval | Â | Â | Â | Â | Human |
 | HISTORICAL | Mendelian Disorders |  | Lymphedema-Cholestasis Syndrome (LCS) | Directed sequencing of all exons in mapped interval |  |  |  | Dropped | Human |
 | HISTORICAL | Mendelian Disorders |  | Paroxysmal Kinesigenic Dyskinesia (PKD) | Directed sequencing of all exons in mapped interval |  |  |  | Dropped | Human |
BROAD | HISTORICAL | Neuroblastoma Tumor Exome Sequencing Project (Collaboration with TARGET) | Â | Neuroblastoma | 100 Neuroblastoma T/N pairs by exome sequencing | phs000467.v7.p1 TARGET: Neuroblastoma (NBL) | Â | Â | Yes | Human |
 | HISTORICAL | Neurodevelopmental disorders |  |  |  |  |  |  | Dropped | Human |
 | HISTORICAL | Pilot metagenomic sequencing of human intestinal microbiome |  |  | Metagenomic sequencing |  |  |  | Dropped | Human |
 | HISTORICAL | Prostate Cancer |  | Prostate Cancer | Whole exome |  |  |  | Dropped | Human |
BROAD | HISTORICAL | Prostate Cancer Genome Sequencing Project | Â | Prostate Cancer | 200 Primary "Lethal" Prostate T/N pairs by a combination of whole exome (150) and whole genome (50) sequencing | phs000447.v1.p1 Prostate Cancer Genome Sequencing Project | Â | Â | Yes | Human |
BROAD | HISTORICAL | Resistance and major response to specific anti-cancer agents | Â | Â | Â | phs000452.v1.p1 Melanoma Genome Sequencing Project | Â | Â | No | Human |
 | HISTORICAL | Schizophrenia |  |  |  |  |  |  | Dropped | Human |
BROAD | HISTORICAL | Schizophrenia Exome Sequencing | Â | Schizophrenia | 5800 samples and 6800 controls from Swedish schizophrenia case-conrolled cohort using exome sequencing | pHS000473 Sweden-Schizophrenia Population-Based Case-Control Exome Sequencing | Â | Â | No | Human |
WASHU | HISTORICAL | Sequencing and Analysis of Treatment-related AML Genomes | Â | t-AML | 25 t-AML T/N pairs using whole genome sequencing | phs000159 | Â | Â | No | Human |
WASHU | HISTORICAL | Sequencing of cultivable microbes from human gut and vagina | Â | Â | Draft reference genomes of 200 bacteria and archea strains from human | Submitted with HMP Bioproject PRJNA43021, PRJNA28331, each genome submitted separately to Nucleotide | Â | Â | Yes | Human |
 | HISTORICAL | Sequencing of cultivable microbes from human gut and vagina |  |  | Draft reference genomes of 200 bacteria and archea strains from human |  |  |  | Dropped | Human |
BAYLOR | HISTORICAL | Sequencing the Human Microbiome | Pilot Metagenomic Sequencing of Human Intestinal Microbiome | Human Microbiome | Metagenomic WGS | PRJNA43017 | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | Sequencing the Human Microbiome | Pilot metagenomic sequencing of human intestinal microbiome | Human Microbiome | 16S | PRJNA48489 | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | Sequencing the Human Microbiome | Sequencing of cultivable microbes from human gut and vagina | Human Microbiome | Whole genome | PRJNA28331 | Â | Â | Yes | Human |
BROAD | HISTORICAL | T2D Exome Sequencing | Â | Type 2 Diabetes (T2D) | 1300 individuals with T2D with and 1300 controls using exome sequencing | Go Type 2 Diabetes | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Breast ductal carcinoma | Whole Exome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Breast ductal carcinoma | Whole Genome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Colon adenocarcinoma | Whole Exome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Colon adenocarcinoma | Whole Genome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Glioblastoma multiforme | Transcriptome | PRJNA74949 | Â | Â | Yes | Human |
BROAD | HISTORICAL | TCGA | Â | Glioblastoma multiforme | Transcriptome | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BAYLOR | HISTORICAL | TCGA | Â | Glioblastoma multiforme | Transcriptome, RNA, cDNA | PRJNA74949 | Â | Â | Yes | Human |
BROAD | HISTORICAL | TCGA | Â | Glioblastoma multiforme | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BAYLOR | HISTORICAL | TCGA | Â | Glioblastoma multiforme | Whole exome | PRJNA74949 | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | TCGA | Â | Glioblastoma multiforme | Whole genome | PRJNA74949 | Â | Â | Yes | Human |
BROAD | HISTORICAL | TCGA | Â | Head and Neck squamous cell carcinoma | Whole Exome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Head and Neck squamous cell carcinoma | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Lung adenocarcinoma | Whole Exome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Lung adenocarcinoma | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Lung squamous cell carcinoma | Whole Exome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Lung squamous cell carcinoma | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
WASHU | HISTORICAL | TCGA | Â | Ovarian serous cystadenoma | Transcriptome | PRJNA74949 | Â | Â | Yes | Human |
BROAD | HISTORICAL | TCGA | Â | Ovarian serous cystadenoma | Transcriptome | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BAYLOR | HISTORICAL | TCGA | Â | Ovarian serous cystadenoma | Transcriptome, RNA, cDNA | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Ovarian serous cystadenoma | Whole Genome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
BROAD | HISTORICAL | TCGA | Â | Ovarian serous cystadenoma | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BAYLOR | HISTORICAL | TCGA | Â | Ovarian serous cystadenoma | Whole exome | PRJNA74949 | Â | Â | Yes | Human |
BAYLOR | HISTORICAL | TCGA | Â | Ovarian serous cystadenoma | Whole genome | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Rectal adenocarcinoma | Whole Exome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Rectal adenocarcinoma | Whole Genome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
BROAD | HISTORICAL | TCGA | Â | Renal clear cell carcinoma | Whole Exome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Renal clear cell carcinoma | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Renal papillary carcinoma | Whole Exome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Renal papillary carcinoma | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Stomach adenocarcinoma | Whole Exome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
BROAD | HISTORICAL | TCGA | Â | Stomach adenocarcinoma | Whole Genome Sequencing | phs000178.v8.p7 The Cancer Genome Atlas (TCGA) | Â | Â | No | Human |
WASHU | HISTORICAL | TCGA | Â | Uterine corpus (endometrial carcinoma) | Whole Exome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
WASHU | HISTORICAL | TCGA | Â | Uterine corpus (endometrial carcinoma) | Whole Genome Sequencing | PRJNA74949 | Â | Â | Yes | Human |
 | HISTORICAL | The Virome in Healthy and Diseased Individuals |  |  | Transcriptome, RNA, cDNA |  | 251 | 100% | Dropped | Human |
WASHU | HISTORICAL | WUGSC TSP Proposal | Â | Multiple | 100 T/N pairs using whole genome sequencing over 12 months | PRJNA176379, PRJNA157235, PRJNA74805, PRJNA41441, phs000159.v4.p2 | Â | Â | Yes | Human |
 | HISTORICAL | X-linked disorders |  |  |  |  |  |  | Dropped | Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Aardvark (Orycteropus afer) | Draft assembly | PRJNA74587 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Big brown bat (Eptesicus fuscus) | Draft assembly | PRJNA72449 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | California leaf-nosed bat (Macrotus californicus) | Draft assembly |  |  |  | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Cape golden mole (Chrysochloris asiatica) | Draft assembly | PRJNA74591 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Chinchilla (Chinchilla laniger) | Draft assembly | PRJNA68239 | Â | Â | Yes | Non-Human |
 | HISTORICAL | 200 Mammals | Phase 1 | Chinese hamster (Cricetulus griseus) | Draft assembly |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Crested porcupine (Hystrix cristata) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Degu (Octodon degus) | Draft assembly | PRJNA74595 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Eastern grey kangaroo (Macropus giganteus) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Euarchontoglires (2 primates and 9 non-primates), Laurasiatheria (4 Chiroptea and 6 non-Chiroptea), 4 Afrotheria, 2 Xenarthra, and 3 Marsupial | De novo genome sequencing and assembly of 30 mammals in phase 1 | Multiple | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Giant anteater (Myrmecophaga tridactyla) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Golden-mantled howling monkey (Alouatta palliata) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Greater horseshoe bat (Rhinolophus ferrumequinum) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Hippopotamus (Hippopotamus amphibius) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Honey Possum (Noolbenger) (Tarsipes rostratus) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Koala (Phascolarctos cinereus) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Lesser Egyptian jerboa (Jaculus jaculus) | Draft assembly | PRJNA72445 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Long-eared (Rufous) elephant shrew (Elephantulus rufescens) | Draft assembly | PRJNA74589 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Malayan tapir (Tapirus indicus) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Mexican free-tailed bat (Tadarida brasiliensis) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Naked mole rat (Heterocephalus glaber) | Draft assembly | PRJNA72441 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | North American porcupine (Erethizon dorsatum) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Ring-tailed lemur (Lemur catta) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Screaming hairy armadillo (Chaetophractus vellerosus) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Springhare (Pedetes capensis) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Star nosed mole (Condylura cristata) | Draft assembly | PRJNA72447 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Syrian/Golden Hamster (Mesocricetus auratus) | Draft assembly | PRJNA77669 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Water chevrotain (Hyemoschus aquaticus) | Draft assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | Weddell seal (Leptonychotes weddellii) | Draft assembly | PRJNA68235 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | West Indian manatee (Trichechus manatus) | Draft assembly | PRJNA68243 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | 200 Mammals | Phase 1 | White rhinocerous (Ceratotherium simum) | Draft assembly | PRJNA74583 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Bovine Genome | Â | Cow (Bos taurus) | Draft Assembly | PRJNA12555Â | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Canine Osteosarcoma and Lymphoma Tumor Resequencing - Pilot Project | Â | Dog (Greyhound, Golden Retriever) (Canis familiaris), Osteosarcoma, Lymphoma | 6 Osteosarcoma T/N pairs from Greyhounds and 6 Lymphoma T/N pairs from Golden Retrievers by whole genome sequencing | PRJNA247491 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Canine models of cancer | Â | Â | Â | PRJNA247491 | Â | Â | No | Non-Human |
AGENCOURT | HISTORICAL | Cat | Â | Felis catus | Low Coverage (~2X) | Â | Â | Â | Yes | Non-Human |
 | HISTORICAL | Coelacanth/Lungfish RNA-Seq Project |  | Slender Lungfish or Spotted African Lungfish (Protopterus dolloi) | RNA sequencing of 3 lungfish tissues - brain, testis, mixed organ (RNAseq libraries at 5Gb each) - to complement 1 tissue from coelacanth |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Defining the Transcriptome of Nine Vertebrate Genomes Using RNA-Seq | Â | Dog, Rabbit, Guinea Pig, Elephant, Armadillo, Bushbaby, Opossum, Anole Lizard, Stickleback | RNA sequence from 11 different tissues in 9 different species | Multiple | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Directed Mouse Mutant Re-Sequencing | Â | Mouse (Mus musculus) | Sequence ~20 mapped and spontaneous mutations and QTL a year and generate mouse exome array set | PRJNA71859 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Discovering biologically relevant Acute Myeloid Leukemia (AML) mutations by sequencing mouse Acute Promyelocytic Leukemia (APL) Genomes | Â | Mouse (Mus musculus), AML | 14 Mouse APL samples using whole genome sequencing | PRJNA247993 | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Ecdysozoan Sequencing | Â | Amphipod Crustacean (Jassa slatteryi) | Draft Assembly | Â | Â | Â | No | Non-Human |
BAYLOR | HISTORICAL | Ecdysozoan Sequencing | Â | Geophilimorph Centipede (Strigamia maritima) | Draft Assembly | PRJNA20501 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Ecdysozoan Sequencing | Â | Horseshoe Crab (Limulus polyphemus) | Draft Assembly | PRJNA20489 | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Ecdysozoan Sequencing | Â | Tardigrade (Hypsibius dujardini) | Draft Assembly | Â | Â | Â | No | Non-Human |
BAYLOR | HISTORICAL | Echinoderm Sequencing | Â | Bat Star (Patiria miniata) | Draft Assembly | PRJNA49323Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Echinoderm Sequencing | Â | Sea Urchin (Strongylocentrotus purpuratus) | Draft Assembly | PRJNA10736 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Evolution of the Human Proteome | Hagfish | Eptatretus burgeri | Draft Assembly |  |  |  | Dropped | Non-Human |
 | HISTORICAL | Evolution of the Human Proteome | Skate | Leucoraja erinacea | Draft Assembly |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Evolution of the Human Proteome | Â | African Coelacanth (Latimeria chalumnae) | Draft Assembly | PRJNA56111 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Evolution of the Human Proteome | Â | Painted Turtle (Chrysemys picta) | Draft Assembly | PRJNA78657, PRJNA210179 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Evolution of the Human Proteome | Â | Spotted Gar (Lepisosteus oculatus) | Draft Assembly | PRJNA68247 | Â | Â | Yes | Non-Human |
JCVI | HISTORICAL | Freshwater Polyp | Freshwater Polyp | Hydra magnipapillata | Draft Assembly | Â | Â | Â | Yes | Non-Human |
AGENCOURT | HISTORICAL | Fruit Fly | Fruit Fly | Drosophila ananassae | Draft Assembly | Â | Â | Â | Yes | Non-Human |
AGENCOURT | HISTORICAL | Fruit Fly | Fruit Fly | Drosophila erecta | Draft Assembly | Â | Â | Â | Yes | Non-Human |
AGENCOURT | HISTORICAL | Fruit Fly | Fruit Fly | Drosophila grimshawi | Draft Assembly | Â | Â | Â | Yes | Non-Human |
AGENCOURT | HISTORICAL | Fruit Fly | Fruit Fly | Drosophila mojavensis | Draft Assembly | Â | Â | Â | Yes | Non-Human |
AGENCOURT | HISTORICAL | Fruit Fly | Fruit Fly | Drosophila virilis | Draft Assembly | Â | Â | Â | Yes | Non-Human |
JCVI | HISTORICAL | Fruit Fly | Fruit Fly | Drosophila willistoni | Draft Assembly | Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Fruit Fly Genomes | Drosophila Genetic Reference Panel | Fruit fly (Drosophila melanogaster) | Whole genome | PRJNA36679 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Fruit Fly Genomes | Â | Fruit fly (Drosophila mauritiana) | Feasibility Sequencing | PRJNA20289 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fruit Fly Genomes | Â | Fruit fly (Drosophila persimilis) | Draft Assembly | PRJNA12705 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Fruit Fly Genomes | Â | Fruit fly (Drosophila pseudoobscura) | Draft Assembly | PRJNA10626Â | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fruit Fly Genomes | Â | Fruit fly (Drosophila sechellia) | Draft Assembly | PRJNA12711 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Fruit Fly Genomes | Â | Fruit fly (Drosophila simulans) | Draft Assembly | PRJNA12464, PRJNA29993, PRJNA18237, PRJNA17569, PRJNA17567, PRJNA17565, PRJNA17563, PRJNA17559, PRJNA17557 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Fruit Fly Genomes | Â | Fruit fly (Drosophila yakuba) | Draft Assembly | PRJNA29999 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Fungal Genome Initiative |  | Fungus (Agaricus bisporus) | Draft Assembly |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Aspergillus nidulans) | Draft Assembly | XM_656863 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Batrachochytrium dendrobatidis) | Draft Assembly | PRJNA13653 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Candida albicans(Strain WO-1)) | Draft Assembly | PRJNA16373 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Candida guilliermondii) | Draft Assembly | XM_001481862 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Candida lusitaniae) | Draft Assembly | PRJNA41079 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Candida tropicalis) | Draft Assembly | PRJNA13675 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Chaetomium globosum) | Draft Assembly | PRJNA16821 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Coccidioides immitis) | Draft Assembly | PRJNA12883 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Coprinus cinereus) | Draft Assembly | XM_002912152 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Cryptococcus neoformans Serotype A) | Draft Assembly | PRJNA177334 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Cryptococcus neoformans Serotype B) | Draft Assembly | PRJNA62089 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Histoplasma capsulatum) | Draft Assembly | PRJNA20041 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Lodderomyces elongisporus) | Draft Assembly | PRJNA19611 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Microsporum canis) | Draft Assembly | PRJNA30939 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Microsporum gypseum) | Draft Assembly | XM_003177621 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Pneumocystis carinii (human and mouse)) | Draft Assembly | PRJNA223519 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Fungal Genome Initiative |  | Fungus (Podospora anserina) | Draft Assembly |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Rhizopus oryzae) | Draft Assembly | PRJNA13066 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Saccharomyces cerevisiae RM11-1a) | Draft Assembly | PRJNA13674 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Schizosaccharomyces japonicus) | Draft Assembly | XM_002175797 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Schizosaccharomyces octosporus) | Draft Assembly | PRJNA13639 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Trichophyton equinum) | Draft Assembly | PRJNA20577 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Trichophyton rubram) | Draft Assembly | PRJNA38221 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Trichophyton tonsurans) | Draft Assembly | PRJNA38223 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Uncinocarpus reesei) | Draft Assembly | PRJNA39807 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | Fungus (Ustilago maydis) | Draft Assembly | PRJNA14007 | Â | Â | yes | Non-Human |
BROAD | HISTORICAL | Fungal Genome Initiative | Â | White Nose Fungus (Geomyces destructans) | Draft Assembly | PRJNA39257 | Â | Â | yes | Non-Human |
WASHU | HISTORICAL | Fungal Genome Initiative | Â | Yeast (Saccharomyces cerevisiae) | 10 strains to full draft, 2-fold coverage up to 25 strains coverage | PRJNA62061 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Fungal Genome Initiative | Â | Yeast (Saccharomyces kluyveri) | Draft Assembly | PRJNA1445, PRJNA209023 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Genome Sequencing of Black Yeasts | Â | Black Yeast | Draft assemblies and annotations for 14 important species of black yeasts with RNA-seq for 5 of the species | PRJNA175043 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Genome and other Sequence Information from Primate Models of HIV Infection |  | Macaque, Rhesus (Chinese population) (Macaca mulatta) | Draft Assembly |  |  |  | Dropped | Non-Human |
 | HISTORICAL | Genome and other Sequence Information from Primate Models of HIV Infection |  | Rhesus Macaque (Macaca mulatta) | RNA Sequencing |  |  |  | Dropped | Non-Human |
JCVI | HISTORICAL | Louse, Body | Louse, Body | Pediculus humanus | Draft Assembly | Â | Â | Â | Yes | Non-Human |
JCVI | HISTORICAL | Mosquito | Â | Anopheles gambiae, S strain | Draft Assembly | Â | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Mouse Genomes | Â | House Mouse (Mus musculus) | 5 Mb targeted sequencing per line, eventually several hundred lines | Â | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Mouse Genomes | Â | House Mouse (Mus musculus) | Exome and targeted resequencing of mouse mutants | PRJNA247497 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Mouse Genomes | Â | House Mouse (Mus musculus) | Finished sequence | PRJNA13183 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Mouse Genomes | Â | House Mouse (Mus musculus) | Finished sequence | PRJNA13183 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Mouse Genomes | Â | House Mouse (Mus musculus) | Finished sequence | Â | Â | Â | No | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Increased Coverage of 2X Mammals | Nine-banded Armadillo (Dasypus novemcinctus) | Draft Assembly | PRJNA12594Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Top-up of Remaining 2X Mammals | Dolphin (Tursiops truncatus) | Draft Assembly | PRJNA20367 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | African Savannah Elephant (Loxodonta africana africana) | Draft Assembly | PRJNA12569 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | African Savannah Elephant (Loxodonta africana africana) | Low coverage (2X) | PRJNA12569 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | African Savannah Elephant (Loxodonta africana africana) | Transcriptome |  |  |  | Dropped | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Alpaca (Vicugna pacos) | Draft Assembly | PRJNA30567 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Alpaca (Vicugna pacos) | Low coverage (2X) | PRJNA30567 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Bushbaby (Galago) (Otolemur garnetti) | Low coverage (2X) | PRJNA16955 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Cat (Felis catus) | Low coverage (2X) | PRJNA16726, PRJNA175699 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Common European Shrew (Sorex araneus) | Draft Assembly | PRJNA13689 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Common European Shrew (Sorex araneus) | Low coverage (2X) | PRJNA13689 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Dolphin (Tursiops truncatus) | Low coverage (2X) | PRJNA20367 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Domestic Cat (Felis catus) | Draft Assembly | PRJNA16726, PRJNA175699 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Elephant Shrew (Elephantulus sp. ) | Low coverage (2X) |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | European Hedgehog (Erinaceus europaeus) | Draft Assembly | PRJNA74585 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | European Hedgehog (Erinaceus europaeus) | Low coverage (2X) | PRJNA74585 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Flying Lemur (Dermoptera sp.) | Draft Assembly | PRJNA20511 | Â | Â | No | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Flying Lemur (Dermoptera sp.) | Low coverage (2X) |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Guinea Pig (Cavia porcellus) | Draft Assembly | PRJNA12583 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Guinea Pig (Cavia porcellus) | Low coverage (2X) | PRJNA12583 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Guinea Pig (Cavia porcellus) | Transcriptome | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Horse (Equus caballas) | Draft Assembly | PRJNA18661 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Horse (Equus caballas) | Low coverage (2X) |  |  |  | Dropped | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Hyrax (Procavia capensis) | Low coverage (2X) | PRJNA13972 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Kangaroo Rat (Dipodomys sp.) | Draft Assembly |  |  |  | Dropped | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Large Flying Fox (Megabat) (Pteropus vampyrus) | Draft Assembly |  |  |  | Dropped | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Large Flying Fox (Megabat) (Pteropus vampyrus) | Low coverage (2X) | PRJNA20325Â | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Little Brown Bat (Microbat) (Myotis lucifugus) | Draft Assembly | PRJNA16951 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Little Brown Bat (Microbat) (Myotis lucifugus) | Low coverage (2X) | PRJNA16951 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Llama (Llama sp.) | Low coverage (2X) |  |  |  | Dropped | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Mole (Cryptomys sp.) | Low coverage (2X) |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Mouse Lemur (Microcebus murinus) | Low coverage (2X) | PRJNA19967 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Nine-banded Armadillo (Dasypus novemcinctus) | Low coverage (2X) | PRJNA12594 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Nine-banded Armadillo (Dasypus novemcinctus) | Transcriptome | PRJNA163137 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Ord's kangaroo rat (Dipodomys ordii) | Low coverage (2X) | PRJNA20385 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Pangolin (Manis pentadactyla) | Draft Assembly | PRJNA20331 | Â | Â | No | Non-Human |
 | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation |  | Pangolin (Manis pentadactyla) | Low coverage (2X) |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Pika (Ochotona princeps) | Draft Assembly | PRJNA74593 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Pika (Ochotona princeps) | Low coverage (2X) | PRJNA19235 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Rabbit (Oryctolagus cuniculus) | Draft Assembly | PRJNA12819 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Rabbit (Oryctolagus cuniculus) | Low coverage (2X) | PRJNA12819 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Rabbit (Oryctolagus cuniculus) | Transcriptome | PRJNA78323 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Sloth (Choloepus hoffmanni) | Draft Assembly | PRJNA30809 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Sloth (Choloepus hoffmanni) | Low coverage (2X) | PRJNA30809 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Squirrel (Spermophilis tridecemlineatus) | Draft Assembly | PRJNA61725 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Squirrel (Spermophilis tridecemlineatus) | Low coverage (2X) | PRJNA13937 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Tarsier (Tarsier syrichta) | Low coverage (2X) | PRJNA20339 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Tenrec (Hedgehog) (Echinops telfairi) | Draft Assembly | PRJNA12590 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Tenrec (Lesser Hedgehog) (Echinops telfairi) | Low coverage (2X) | PRJNA12590 | Â | Â | Yes | Non-Human |
BGI | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Tree Shrew (Tupaia belangeri) | Draft Assembly | PRJNA20273 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Genomes for Comparative Genome Annotation | Â | Tree Shrew (Tupaia belangeri) | Low coverage (2X) | PRJNA13971 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Cow (Bos taurus) | Genome Refinement | PRJNA20275 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Cow (Bos taurus) | Genome Refinement | PRJNA20275 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Laboratory Opposum (Monodelphis domestica) | Genome Refinement | PRJNA74623 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Marmoset (Callithrix jacchus) | Genome Refinement | PRJNA20401, PRJNA46205 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Rat (Rattus norvegicus) | Genome Refinement | PRJNA222509 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Rat (Rattus norvegicus) | Genome Refinement | PRJNA10629 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Rhesus Macaque (Macaca mulatta) | Genome Refinement | PRJNA253406 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Multiple Mammalian Y Chromosomes | Â | Rhesus Macaque (Macaca mulatta) | Genome Refinement | PRJNA16397, PRJNA12537 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Nematode Sequencing | Â | Entomopathogenic Nematode (Heterorhabditis bacteriophora) | Draft Assembly | PRJNA13977 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Nematode Sequencing | Â | Hookworm (Ancylostoma caninum) | Draft Assembly | PRJNA72585, PRJNA20441 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Nematode Sequencing | Â | Hookworm (Necator americanus) | Draft Assembly | PRJNA72135, PRJNA20443 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Nematode Sequencing | Â | Nematode (Pristionchus pacificus) | Draft Assembly | PRJNA12644 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Nematode Sequencing | Â | Strongylid nematode (Ancylostoma duodenale replaces Nippostrongylus brasiliensis) | Draft Assembly | PRJNA72581, PRJNA12858 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Nematode Sequencing | Â | Strongylid nematode (Teladorsagia circumcincta) | Draft Assembly | PRJNA72569 | Â | Â | No | Non-Human |
WASHU | HISTORICAL | Nematode Sequencing | Â | Strongylid nematode (Trichostrongylus colubriformis replaces Trichostrongylus vitrinus) | Draft Assembly | PRJNA74537 | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Amastigomonas sp. | Draft Assembly | PRJNA20469 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Fungus (Spizellomyces punctatus) | Low coverage (2X) | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Protist (Amoebidium parasiticum) | Low coverage (2X) | PRJNA189476 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Protist (Capsaspora owczarzaki) | Draft Assembly | PRJNA20341 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Protist (Ministeria vibrans) | Draft Assembly | PRJNA39421 | Â | 100% | No | Non-Human |
 | HISTORICAL | Origins of Multicellularity |  | Protist (Nuclearia simplex) | Draft Assembly | PRJNA20493 |  | 100% | Dropped | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Protist (Salpingoeca rosetta) | Draft Assembly | PRJNA37927 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Protist (Schaeroforma arctica) | Low coverage (2X) | PRJNA20463 | Â | 100% | Yes | Non-Human |
 | HISTORICAL | Origins of Multicellularity |  | Protist (Stephanoeca or Acanthocoepis sp.) | Low coverage (2X) |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Protist (Thecamonas trahens) | Draft Assembly | PRJNA20469 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Yeast (Allomyces macrogynus) | Draft Assembly | PRJNA20563 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Origins of Multicellularity | Â | Yeast (Mortierella verticulata) | Low coverage (2X) | PRJNA20603 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Anole Lizard (Anolis carolinensis) | Draft Assembly | PRJNA18787 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Anole Lizard (Anolis carolinensis) | Transcriptome | PRJNA78917 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Chicken (Gallus gallus) | Draft Assembly | PRJNA10808 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Chicken (Gallus gallus) | Genome Refinement | PRJNA13342 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Dog (Canis familiaris) | Draft Assembly | PRJNA13179 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Dog (Canis familiaris) | Genome Refinement | PRJNA13179 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Dog (Canis familiaris) | Transcriptome | PRJNA78827 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Elephant Shark (Callorhynchus milii) | Draft Assembly | PRJNA18361 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Ferret (Mustela putorius furo) | Draft Assembly | PRJNA78317 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Gray Short-Tailed Opposum (Monodelphis domestica) | Draft Assembly | PRJNA12561 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Gray Short-Tailed Opposum (Monodelphis domestica) | Transcriptome | PRJNA164819 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Platypus (Ornithorhynchus anatinus) | Draft Assembly | PRJNA12885, PRJNA19039 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Prarie Vole (Microtus ochrogaster) | Draft assembly, SNP resource, and low-coverage of related species | PRJNA72443 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Sea Lamprey (Petromyzon marinus) | Draft Assembly | PRJNA12880 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Threespine Stickleback (Gasterosteus aculeatus) | Draft Assembly | PRJNA13579 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Threespine Stickleback (Gasterosteus aculeatus) | Transcriptome | PRJNA163141 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Tilapia Cichlid (Astatotilapia burtoni) | Draft Assembly | PRJNA60363 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Tilapia Cichlid (Metriaclima zebra) | Draft Assembly | PRJNA60369 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Tilapia Cichlid (Oreochromis niloticus) | Draft Assembly | PRJNA59571 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Tilapia Cichlid (Paralibidichromis chilotes) | Draft Assembly | PRJNA60367 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Zebra finch (Taeniopygia guttata) | Draft Assembly | PRJNA17289, PRJNA32405 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Other Model Chordate & Vertebrate Genomes | Â | Zebra finch (Taeniopygia guttata) | Physical Map | Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Acorn Worm (Saccoglossus kowalesvskii) | Draft Assembly | PRJNA12887 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Other Model Invertebrate Genomes |  | Choanoflagellate (Monosiga ovata) | Draft Assembly | PRJNA12871 |  |  | Dropped | Non-Human |
WASHU | HISTORICAL | Other Model Invertebrate Genomes | Â | Freshwater Snail (Biomphalaria glabrata) | Draft Assembly | PRJNA12879 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Honey Bee (Apis mellifera) | Draft Assembly | PRJNA10625 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Honey Bee (Apis mellifera) | Genome Refinement | Â PRJNA10625 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Parasitoid Wasp (Nasonia giraulti) | Draft Assembly | PRJNA20223 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Parasitoid Wasp (Nasonia longicornis) | Draft Assembly | PRJNA20225 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Parasitoid Wasp (Nasonia vitripennis) | Draft Assembly | PRJNA13660 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Pea Aphid (Acyrtohosiphon pisum) | Draft Assembly | PRJNA13657 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Other Model Invertebrate Genomes |  | Placazoan (Trichoplax adhaerens) | Draft Assembly |  |  |  | Dropped, done elsewhere | Non-Human |
WASHU | HISTORICAL | Other Model Invertebrate Genomes | Â | Planarian (Schmidtea mediterranea) | Draft Assembly | PRJNA12585 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Invertebrate Genomes | Â | Pufferfish (Tetraodon nigroviridis) | Draft Assembly | PRJNA20435 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Other Model Invertebrate Genomes | Â | Red Flour Beetle (Tribolium castaneum) | Draft Assembly | PRJNA12540 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Invertebrate Genomes | Â | Sea Squirt (Ciona savignyi) | Draft Assembly | PRJNA1435 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Other Model Invertebrate Genomes | Â | Sea slug (Aplysia californica) | Draft Assembly | PRJNA13635 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Capronia coronata / Exophiala) | Draft Assembly | PRJNA164585 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Capronia epimyces) | Draft Assembly | PRJNA164587 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Cladophialophora bantiana) | Draft Assembly | PRJNA233316 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Cladophialophora carrionii) | Draft Assembly | PRJNA185784 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Cladophialophora psammophila) | Draft Assembly | Â PRJNA164589 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Cladophialophora yegresii) | Draft Assembly | PRJNA164591 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Coniosporium apollinis) | Draft Assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Coniosporium epidermidis) | Draft Assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Exophiala aquamarina) | Draft Assembly | PRJNA164593 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Exophiala dermatitidis) | Draft Assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Exophiala spinifera) | Draft Assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Fonsecaea pedrosoi) | Draft Assembly | PRJNA233314 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Ochroconis gallopava) | Draft Assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Phialophora europaea) | Draft Assembly | Â | Â | Â | No | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Black Yeast (Rhinocladiella mackenziei) | Draft Assembly | PRJNA233315 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Pathogens and Vectors | Â | Mosquito (Anopheles gambiae (M strain)) | Draft Assembly | PRJNA20295 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Mosquito (Anopheles species) | High quality assembly for 13 species; 200,000 EST of each species | PRJNA67129 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Protist (Plasmodium vivax) | 8x coverage of 6 species/strains; 40k ESTs | PRJNA67239/PRJNA67237/PRJNA67065/PRJNA65119 | Â | 100% | Yes | Non-Human |
BROAD | HISTORICAL | Pathogens and Vectors | Â | Protist (Plasmodiums and other related species) | Draft sequence and ESTs of multiple isolates of P. falciparum, P. vivax, and related species for comparative and model system studies | PRJNA72437 | Â | 100% | Yes | Non-Human |
BAYLOR | HISTORICAL | Pathogens and Vectors | Â | Sandfly (Lutzomyia longipalpis) | BAC library construction; BAC-end sequencing | PRJNA20279 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Pathogens and Vectors |  | Sandfly (Lutzomyia longipalpis) | BAC library construction; BAC-end sequencing |  |  |  | Dropped | Non-Human |
WASHU | HISTORICAL | Pathogens and Vectors | Â | Sandfly (Phlebotomus papatasi) | BAC library construction; BAC-end sequencing | PRJNA20293 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Pathogens and Vectors | Â | Triatomid Bug (Rhodnius prolixus) | Draft Assembly | PRJNA13648 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Pathogens and Vectors | Â | Trichinella (Trichinella spiralis) | Draft Assembly | PRJNA12647, PRJNA12603, PRJNA66457 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Pathogens and Vectors | Â | Trichinella (Trichinella spiralis) | Genome Refinement | PRJNA12647, PRJNA12603, PRJNA66457 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Pathogens and Vectors |  | Tsetse Fly (Glossina species) | Draft genome assembly and transcriptome sequencing of five Glossina genomes and two comparative genomes; low coverage genome sequencing of ~12 field populations. |  |  |  | Dropped | Non-Human |
BAYLOR | HISTORICAL | Peromyscus | Â | Deer Mouse (Peromyscus californicus) | Low coverage (2X) | PRJNA53595 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Peromyscus | Â | Deer Mouse (Peromyscus maniculatus) | Draft Assembly | PRJNA53563 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Peromyscus | Â | Deer Mouse (Peromyscus polionotus) | Low coverage (2X) | PRJNA53593 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Peromyscus | Â | White-footed mouse (Peromyscus leucopus) | Low coverage (2X) | PRJNA53591Â | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans | Â | Cyptococcus (multiple variety) (Cyptococcus gatti) | Draft assembly | Â PRJNA174567 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans | Â | Cyptococcus (multiple variety) (Cyptococcus neoformans (various species) | De novo genome assembly of 113 C. neoformans var. grubii, 15 var. neoformans, 14 hybrids, 15 C. gatti, and 18 other Tremellales species; resequencing of 159 for var. grubii | Â PRJNA174567 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans | Â | Cyptococcus (multiple variety) (Cyptococcus neoformans var. grubii) | Draft assembly | Â PRJNA174567 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans | Â | Cyptococcus (multiple variety) (Cyptococcus neoformans var. grubii) | Resequencing | Â PRJNA174567 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans | Â | Cyptococcus (multiple variety) (Cyptococcus neoformans var. neoformans) | Draft assembly | Â PRJNA174567 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans | Â | Cyptococcus (multiple variety) (Hybrids) | Draft assembly | Â PRJNA174567 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Population genomic analysis of the human pathogenic fungus Cyptococcus neoformans | Â | Cyptococcus (multiple variety) (Other Tremellales species) | Draft assembly | Â PRJNA174567 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Primate Genomes |  | Bonobo (Pan paniscus) | Fosmid-end sequencing |  |  |  | Dropped | Non-Human |
BROAD | HISTORICAL | Primate Genomes | Â | Bushbaby (Otolemur garnetti) | Draft Assembly | PRJNA16955 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Primate Genomes | Â | Bushbaby/Galago (Otolemur garnetti) | Transcriptome | PRJNA163171 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Primate Genomes | Â | Chimpanzee (Pan troglodytes) | Draft Assembly | PRJNA13184 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Chimpanzee (Pan troglodytes) | Draft Assembly | PRJNA10627 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Chimpanzee (Pan troglodytes) | Genome Refinement | PRJNA13184 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Cynomolgus Macaque (Macaca fascicularis) | Draft Assembly | PRJNA20409 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Gibbon (Nomascus leucogenys) | BAC-end sequencing | PRJNA13975, PRJNA62133 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Primate Genomes | Â | Gibbon (Nomascus leucogenys) | Draft Assembly | PRJNA13975Â | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Gibbon (Nomascus leucogenys) | Targeted BAC finishing | Â | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Marmoset (Callithrix jacchus) | Draft Assembly | PRJNA20401, PRJNA46205 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Primate Genomes | Â | Marmoset (Callithrix jacchus) | Draft Assembly | PRJNA20401 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Marmoset (Callithrix jacchus) | Targeted BAC finishing | Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Primate Genomes | Â | Marmoset (Callithrix jacchus) | Targeted BAC finishing | PRJNA20401 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Primate Genomes | Â | Olive Baboon (Papio anubis) | Draft Assembly | PRJNA54005Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Primate Genomes | Â | Orangutan (Pongo abelii) | Draft Assembly | PRJNA20869 | Â | Â | Yes | Non-Human |
 | HISTORICAL | Primate Genomes |  | Orangutan (Pongo abelii) | Targeted BAC finishing |  |  |  | Dropped | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Orangutan (Pongo pygmaeus) | Draft Assembly | PRJNA74653 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Orangutan (Pongo pygmaeus) | Targeted BAC finishing | Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Primate Genomes | Â | Rhesus Macaque (Macaca mulatta) | Draft Assembly | PRJNA12537Â | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Rhesus Macaque (Macaca mulatta) | Draft Assembly | PRJNA16397, PRJNA12537 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Rhesus Macaque (Macaca mulatta) | Targeted BAC finishing | Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Primate Genomes | Â | Rhesus Macaque (Macaca mulatta) | Targeted BAC finishing | PRJNA12537Â | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Primate Genomes | Â | Squirrel Monkey (Saimiri sp.) | Draft Assembly | PRJNA67945 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Primate Genomes | Â | Tarsier (Tarsier syrichta) | Draft Assembly | PRJNA20339 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Protist Systems | Â | Amoeba (Acanthamoeba castellanii) | Draft Assembly | PRJNA20303 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Protist Systems | Â | Slime mold (Physarum polycephalum) | Draft Assembly | PRJNA12851 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Protist Systems | Â | Spirotrich ciliate (Oxytricha trifallax [macronucleus]) | Draft Assembly | PRJNA74629 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Protist Systems | Â | Spirotrich ciliate (Oxytricha trifallax [micronucleus + equivalent macronucleus sequences]) | Draft Assembly | PRJNA74629 | Â | Â | Yes | Non-Human |
BROAD | HISTORICAL | Protist Systems | Â | Tetrahymena (Tetrahymena thermophila ) | Draft Assembly | PRJNA177802 | Â | 100% | Yes | Non-Human |
BAYLOR | HISTORICAL | Rat Genome | Â | Rat (Rattus norvegicus) | Draft Assembly | PRJNA10629Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Rat Genome | Â | Rat (Rattus norvegicus) | Genome Refinement | PRJNA10629Â | Â | Â | No | Non-Human |
 | HISTORICAL | Rat Genome |  | Rat (Rattus norvegicus) | SNP Discovery |  |  |  | Dropped | Non-Human |
WASHU | HISTORICAL | Roundworm Genomes | Â | Roundworm (Caenorhabditis brenneri) | Draft Assembly | PRJNA20035 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Roundworm Genomes | Â | Roundworm (Caenorhabditis brenneri) | Genome Refinement | PRJNA20035 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Roundworm Genomes | Â | Roundworm (Caenorhabditis briggsae) | Draft Assembly | PRJNA20855 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Roundworm Genomes | Â | Roundworm (Caenorhabditis elegans) | Finishing | Â | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Roundworm Genomes | Â | Roundworm (Caenorhabditis japonica) | Draft Assembly | PRJNA12591 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Roundworm Genomes | Â | Roundworm (Caenorhabditis remanei) | Draft Assembly | PRJNA12588, PRJNA53967 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | Roundworm Genomes | Â | Roundworm (Caenorhabditis remanei) | Genome Refinement | PRJNA12588, PRJNA53967 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | Tammar Wallaby Genome | Â | Tammar Wallaby (Macropus eugenii) | Draft Assembly | PRJNA12587 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila biarmipes) | Draft Assembly | PRJNA62307 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila bipectinata) | Draft Assembly | PRJNA62313Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila elegans) | Draft Assembly | PRJNA62315Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila eugracilis) | Draft Assembly | PRJNA67709Â | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila ficusphila) | Draft Assembly | PRJNA62317 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila kikkawai) | Draft Assembly | PRJNA62319 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila melanogaster, OregonR) | Draft Assembly | PRJNA252961 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila rhopaloa) | Draft Assembly | PRJNA67665 | Â | Â | Yes | Non-Human |
BAYLOR | HISTORICAL | modENCODE Comparative Genomics | Â | Fruit fly (Drosophila takahashii) | Draft Assembly | PRJNA62321 | Â | Â | Yes | Non-Human |
WASHU | HISTORICAL | modENCODE Comparative Genomics | Â | Roundworm (Caenorhabditis sp. 11 (JU1373)) | Draft Assembly | PRJNA63453, PRJNA53597 | Â | Â | Yes | Non-Human |
 | HISTORICAL | modENCODE Comparative Genomics |  | Roundworm (Caenorhabditis sp. 7 (JU1199)) | Draft Assembly |  |  |  | Dropped | Non-Human |
 | HISTORICAL | modENCODE Comparative Genomics |  | Roundworm (Caenorhabditis sp. 9 (JU1325)) | Draft Assembly |  |  |  | Dropped | Non-Human |